Factsheet for Zm00001d016704_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05187	Sorghum	cytosol	97.0	97.65
Os02t0533900-01	Rice	plasma membrane	92.0	91.69
TraesCS5A01G024500.1	Wheat	cytosol	90.0	90.0
TraesCS5D01G031200.1	Wheat	golgi	89.67	89.37
TraesCS5B01G022300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.67	89.37
HORVU5Hr1G006730.1	Barley	cytosol, mitochondrion	89.67	89.37
GSMUA_Achr6P19390_001	Banana	cytosol	77.33	83.15
PGSC0003DMT400067716	Potato	cytosol	79.0	79.0
Solyc11g068540.1.1	Tomato	endoplasmic reticulum, extracellular	78.67	78.67
VIT_06s0080g00560.t01	Wine grape	cytosol	77.67	78.45
KRH42198	Soybean	cytosol	78.0	78.26
KRH26651	Soybean	cytosol	77.33	77.59
Bra034353.1-P	Field mustard	cytosol	76.67	77.44
CDY30547	Canola	cytosol	76.67	77.44
KRH22668	Soybean	cytosol	77.0	77.26
CDX77117	Canola	cytosol	76.33	76.59
AT2G27450.2	Thale cress	cytosol	76.33	70.25
Bra012018.1-P	Field mustard	cytosol	16.33	62.82
CDX71452	Canola	plastid	28.67	38.91
Zm00001d023729_P005	Maize	plastid	24.0	22.29
Zm00001d021506_P001	Maize	extracellular, plasma membrane	29.33	21.26
Zm00001d027876_P004	Maize	plastid	26.0	17.93
Zm00001d048292_P003	Maize	plastid	22.33	15.73

Protein Annotations

KEGG:00330+3.5.1.53	EntrezGene:100282130	Gene3D:3.60.110.10	MapMan:8.1.1.3	ProteinID:AQK71518.1	UniProt:B6TKZ3
EMBL:BT064287	EMBL:BT064416	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	EMBL:EU965658	GO:GO:0003674
GO:GO:0003824	GO:GO:0006596	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0016810	GO:GO:0050126	InterPro:IPR003010	InterPro:IPR036526
InterPro:N-carbamoylputrescine_amidase	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF3	SUPFAM:SSF56317
TIGRFAMs:TIGR03381	UniParc:UPI000182E1B5	EnsemblPlantsGene:Zm00001d016704	EnsemblPlants:Zm00001d016704_P001	EnsemblPlants:Zm00001d016704_T001	SEG:seg

Description

N-carbamoylputrescine amidase

Coordinates

chr5:-:173174126..173178848

Molecular Weight (calculated)

33477.8 Da

IEP (calculated)

6.317

GRAVY (calculated)

-0.270

Length

300 amino acids

Sequence
(BLAST)

001: MAAAAGRKVA VAAVQFACTD VEAENVATAE RLIREAHKKG AKIVLVQELF EGHYFCQAQR LDFFRRAKPY KGNPTIIRMQ QLAKELEVVI PVSFFEEANN
101: AHYNSVAIID ADGADLGLYR KSHIPDGPGY QEKFYFNPGD TGFKAFKTKY ATIGVGICWD QWFPECARAM ALLGAEILFY PTAIGSEPQD CNLDSREHWK
201: RVMQGHAGAN LVPLVASNRI GRETVDTEHG KSSITFYGNS FIAGPTGEIV KLANDKDEEV LVAEFDLDEI KSIRHGWGIF RDRRPELYKV LLTLDGEKQS

Best Arabidopsis Sequence Match ( AT2G27450.1 )
(BLAST)

001: METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

Arabidopsis Description

CPAN-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.