Factsheet for Zm00001d048292_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40066	Sorghum	plastid	67.14	81.02
Os03t0175600-01	Rice	mitochondrion	55.63	76.45
GSMUA_Achr1P21960_001	Banana	cytosol	52.58	72.96
HORVU4Hr1G076100.13	Barley	plastid	58.45	71.97
TraesCS4B01G292100.1	Wheat	plastid	58.69	71.84
TraesCS4A01G012200.1	Wheat	golgi, unclear	58.69	71.84
TraesCS4D01G290800.1	Wheat	plastid	58.22	71.47
CDX91178	Canola	plastid	27.46	68.02
CDX91177	Canola	cytosol, extracellular, nucleus	18.78	65.04
KRH52237	Soybean	nucleus	49.77	60.23
VIT_04s0008g01690.t01	Wine grape	plastid	51.41	60.16
Zm00001d027876_P004	Maize	plastid	61.27	60.0
CDX78463	Canola	plastid	50.94	59.62
Bra006138.1-P	Field mustard	plastid	50.94	59.62
CDX70441	Canola	plastid	50.7	58.86
Solyc08g062190.2.1	Tomato	plastid	50.94	58.49
AT5G12040.1	Thale cress	plastid	50.47	58.27
GSMUA_Achr1P12420_001	Banana	mitochondrion	48.83	58.1
Solyc07g041280.2.1	Tomato	plastid	48.59	57.18
KRG89323	Soybean	plastid	30.75	56.71
CDX97163	Canola	plastid	47.89	53.26
PGSC0003DMT400050357	Potato	cytosol	42.49	50.99
Bra008919.1-P	Field mustard	plastid	47.42	46.98
CDX69711	Canola	plastid	47.18	46.74
Zm00001d023729_P005	Maize	plastid	18.08	23.84
Zm00001d016704_P001	Maize	extracellular	15.73	22.33
Zm00001d021506_P001	Maize	extracellular, plasma membrane	16.43	16.91

Protein Annotations

EntrezGene:100279870	Gene3D:3.60.110.10	MapMan:4.1.2.1.4	UniProt:A0A1D6PJ22	ProteinID:AQL09317.1	InterPro:C-N_Hydrolase
InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526	PFAM:PF00795	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF30	SUPFAM:SSF56317	TMHMM:TMhelix	UniParc:UPI0008441A4B	EnsemblPlantsGene:Zm00001d048292
EnsemblPlants:Zm00001d048292_P003	EnsemblPlants:Zm00001d048292_T003	SEG:seg	:	:	:

Description

carbon-nitrogen hydrolase homolog1Omega-amidase chloroplastic

Coordinates

chr9:-:154002114..154006592

Molecular Weight (calculated)

46120.7 Da

IEP (calculated)

7.961

GRAVY (calculated)

0.107

Length

426 amino acids

Sequence
(BLAST)

001: MVAAAAAAAA ATATATATAT AAALLAPGLK LCAGRARVSS PSGLPPRRVT AMASAPNSSF RPEEARYPPA LELPIPRLSK FKVALCQLSV TADKSRNIAH
101: ARAAIEKAAS DGAKLVVLPE IWNGPYSNDS FPEYAEDIEA GGDAAPSFSM LSEVARSLQI TLVGGSIAER SGNNLYNTCC VFGSDGQLKG KHRKIHLFDI
201: DIPGKITFKE SKTLTAGQSP TVVDTDVGRI GIGICYDIRF QELAMLYAAR GAVVCAVFGP CHLLTHSICK MDRHFSDYFL CSFVVLSWCI QHDYWTTALG
301: VAAKGEVINE FEPQGCRQSV KMLINCLLPA VCCNMRSSSR YQCRLCCLGT LHSCWTYLGI FKINGFAVVL KTVFGEVIAT TEHEEATIIA DIDYSLIEQR
401: RQFLPVQHQR RGDLYQLVDV QRLGSQ

Best Arabidopsis Sequence Match ( AT5G12040.1 )
(BLAST)

001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK

Arabidopsis Description

NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.