Factsheet for HORVU4Hr1G076100.13

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G012200.1	Wheat	golgi, unclear	97.69	97.13
TraesCS4B01G292100.1	Wheat	plastid	97.4	96.84
TraesCS4D01G290800.1	Wheat	plastid	96.82	96.54
Os03t0175600-01	Rice	mitochondrion	82.08	91.61
KXG40066	Sorghum	plastid	86.42	84.7
CDX91177	Canola	cytosol, extracellular, nucleus	29.19	82.11
GSMUA_Achr1P21960_001	Banana	cytosol	71.97	81.11
KRH52237	Soybean	nucleus	68.79	67.61
VIT_04s0008g01690.t01	Wine grape	plastid	71.1	67.58
Bra006138.1-P	Field mustard	plastid	70.23	66.76
CDX78463	Canola	plastid	70.23	66.76
GSMUA_Achr1P12420_001	Banana	mitochondrion	68.79	66.48
Solyc08g062190.2.1	Tomato	plastid	71.1	66.31
CDX70441	Canola	plastid	69.94	65.94
AT5G12040.1	Thale cress	plastid	70.23	65.85
Solyc07g041280.2.1	Tomato	plastid	68.79	65.75
CDX91178	Canola	plastid	32.37	65.12
Zm00001d027876_P004	Maize	plastid	81.79	65.06
HORVU7Hr1G034840.14	Barley	cytosol	44.51	63.37
CDX97163	Canola	plastid	67.34	60.84
PGSC0003DMT400050357	Potato	cytosol	61.85	60.28
Zm00001d048292_P003	Maize	plastid	71.97	58.45
KRG89323	Soybean	plastid	37.86	56.71
Bra008919.1-P	Field mustard	plastid	66.19	53.26
CDX69711	Canola	plastid	65.9	53.02
HORVU5Hr1G006730.1	Barley	cytosol, mitochondrion	23.7	27.24
HORVU5Hr1G076080.1	Barley	mitochondrion	22.83	16.46

Protein Annotations

Gene3D:3.60.110.10	MapMan:4.1.2.1.4	UniProt:A0A287PQG2	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006107	GO:GO:0006108	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016787
GO:GO:0016810	GO:GO:0050152	EnsemblPlantsGene:HORVU4Hr1G076100	EnsemblPlants:HORVU4Hr1G076100.13	InterPro:IPR003010	InterPro:IPR036526
PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF30	SUPFAM:SSF56317	UniParc:UPI000862D69A
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:599928218..599932867

Molecular Weight (calculated)

37198.3 Da

IEP (calculated)

7.859

GRAVY (calculated)

-0.099

Length

346 amino acids

Sequence
(BLAST)

001: MRAAATSTAI SLLSPSHLRT SAAASLPYRR RPRIAAMAAA ASSFRPEAAR SPAAVEPPAP PLSKFKVALC QLSVTADKAR NIARARAAIE SAAADGAKLV
101: LLPEIWNGPY SNDSFPEYAE DIEAGGDAAP SFSMMSDVAR SLQITLVGGS ISERSGNSLY NTCCVFGSDG KLKGKHRKVH LFDIDIPGKI TFQESKTLTA
201: GQDLTVVDTD VGRIGIGICY DIRFQELAML YAARGAHLLC YPGAFNMTTG PLHWELLQRA RAADNQLFVA TCAPARDTGS SYVAWGHSTL VGPFGEVIAT
301: TEHDEATIIA EIDYSLIEQR RQFLPLRHQR RGDLYQLVDV QGSGSK

Best Arabidopsis Sequence Match ( AT5G12040.1 )
(BLAST)

001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK

Arabidopsis Description

NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.