Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006138.1-P | Field mustard | plastid | 93.77 | 95.05 |
| CDX78463 | Canola | plastid | 93.77 | 95.05 |
| CDX91177 | Canola | cytosol, extracellular, nucleus | 31.44 | 94.31 |
| CDX70441 | Canola | plastid | 93.22 | 93.73 |
| CDX91178 | Canola | plastid | 39.3 | 84.3 |
| GSMUA_Achr1P21960_001 | Banana | cytosol | 68.56 | 82.41 |
| Os03t0175600-01 | Rice | mitochondrion | 64.77 | 77.1 |
| VIT_04s0008g01690.t01 | Wine grape | plastid | 75.34 | 76.37 |
| KRH52237 | Soybean | nucleus | 72.36 | 75.85 |
| CDX97163 | Canola | plastid | 77.51 | 74.67 |
| Solyc08g062190.2.1 | Tomato | plastid | 72.63 | 72.24 |
| KXG40066 | Sorghum | plastid | 67.75 | 70.82 |
| HORVU4Hr1G076100.13 | Barley | plastid | 65.85 | 70.23 |
| TraesCS4B01G292100.1 | Wheat | plastid | 65.31 | 69.25 |
| TraesCS4D01G290800.1 | Wheat | plastid | 65.04 | 69.16 |
| TraesCS4A01G012200.1 | Wheat | golgi, unclear | 65.04 | 68.97 |
| GSMUA_Achr1P12420_001 | Banana | mitochondrion | 66.12 | 68.16 |
| Bra008919.1-P | Field mustard | plastid | 76.15 | 65.35 |
| CDX69711 | Canola | plastid | 75.88 | 65.12 |
| PGSC0003DMT400050357 | Potato | cytosol | 62.06 | 64.51 |
| KRG89323 | Soybean | plastid | 39.57 | 63.2 |
| Zm00001d027876_P004 | Maize | plastid | 65.04 | 55.17 |
| Zm00001d048292_P003 | Maize | plastid | 58.27 | 50.47 |
| AT4G08790.1 | Thale cress | plastid | 22.76 | 27.36 |
| AT2G27450.2 | Thale cress | cytosol | 20.33 | 23.01 |
| AT5G64370.1 | Thale cress | cytosol | 20.05 | 18.14 |
Protein Annotations
| Gene3D:3.60.110.10 | MapMan:4.1.2.1.4 | EntrezGene:831077 | UniProt:A0A178U770 | ProteinID:AED91753.1 | ProteinID:AED91754.1 |
| ArrayExpress:AT5G12040 | EnsemblPlantsGene:AT5G12040 | RefSeq:AT5G12040 | TAIR:AT5G12040 | RefSeq:AT5G12040-TAIR-G | EnsemblPlants:AT5G12040.1 |
| TAIR:AT5G12040.1 | EMBL:AY075592 | EMBL:AY093711 | Unigene:At.43633 | EMBL:BX829894 | InterPro:C-N_Hydrolase |
| InterPro:C-N_Hydrolase_sf | ProteinID:CAB87677.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006107 | GO:GO:0006108 |
| GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016787 | GO:GO:0016810 |
| GO:GO:0050152 | InterPro:IPR003010 | InterPro:IPR036526 | RefSeq:NP_196765.2 | RefSeq:NP_974769.1 | ProteinID:OAO89489.1 |
| PFAM:PF00795 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50263 | PANTHER:PTHR23088 | PANTHER:PTHR23088:SF30 | UniProt:Q8RUF8 | SUPFAM:SSF56317 |
| UniParc:UPI00000A0D98 | SEG:seg | : | : | : | : |
Description
NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
Coordinates
chr5:+:3884949..3888077
Molecular Weight (calculated)
40332.4 Da
IEP (calculated)
8.752
GRAVY (calculated)
-0.175
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.