Factsheet for AT4G08790.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70138	Canola	plastid	84.69	87.25
CDX75139	Canola	plastid	83.39	85.91
Bra037878.1-P	Field mustard	plastid	83.06	78.22
PGSC0003DMT400060185	Potato	plastid	70.36	76.87
Solyc05g054940.2.1	Tomato	plastid	70.36	76.87
GSMUA_Achr2P19050_001	Banana	cytosol	62.87	68.2
KRG93006	Soybean	cytosol	63.19	67.6
KRH36253	Soybean	nucleus	68.08	65.31
VIT_13s0067g03530.t01	Wine grape	plastid	69.06	65.23
TraesCS5D01G121200.1	Wheat	plastid	63.52	64.57
TraesCS5A01G108700.1	Wheat	plastid	64.5	63.67
Os12t0502500-01	Rice	plastid	64.5	61.3
Zm00001d023729_P005	Maize	plastid	62.54	59.44
EES16018	Sorghum	plastid	62.87	58.66
TraesCS5B01G114100.1	Wheat	plastid, unclear	63.52	57.35
AT5G12040.1	Thale cress	plastid	27.36	22.76
AT2G27450.2	Thale cress	cytosol	21.5	20.25
AT5G64370.1	Thale cress	cytosol	17.59	13.24

Protein Annotations

MapMan:10.3.3.2.3	Gene3D:3.60.110.10	EntrezGene:826449	ProteinID:AEE82678.1	EMBL:AF372904	ArrayExpress:AT4G08790
EnsemblPlantsGene:AT4G08790	RefSeq:AT4G08790	TAIR:AT4G08790	RefSeq:AT4G08790-TAIR-G	EnsemblPlants:AT4G08790.1	TAIR:AT4G08790.1
EMBL:AY133544	Unigene:At.22636	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	ProteinID:CAB78004.1	ProteinID:CAB82115.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536	GO:GO:0016787	GO:GO:0016810
GO:GO:0046686	InterPro:IPR003010	InterPro:IPR036526	RefSeq:NP_567340.1	PFAM:PF00795	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF27	UniProt:Q94JV5
SUPFAM:SSF56317	UniParc:UPI00000AA6D0	:	:	:	:

Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]

Coordinates

chr4:-:5608148..5611215

Molecular Weight (calculated)

33972.8 Da

IEP (calculated)

6.043

GRAVY (calculated)

-0.021

Length

307 amino acids

Sequence
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.