Factsheet for TraesCS5A01G108700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G121200.1	Wheat	plastid	95.18	98.01
TraesCS5B01G114100.1	Wheat	plastid, unclear	97.75	89.41
Os12t0502500-01	Rice	plastid	89.39	86.07
Zm00001d023729_P005	Maize	plastid	86.82	83.59
EES16018	Sorghum	plastid	87.78	82.98
GSMUA_Achr2P19050_001	Banana	cytosol	67.85	74.56
PGSC0003DMT400060185	Potato	plastid	64.31	71.17
Solyc05g054940.2.1	Tomato	plastid	63.67	70.46
KRG93006	Soybean	cytosol	63.02	68.29
VIT_13s0067g03530.t01	Wine grape	plastid	69.13	66.15
KRH36253	Soybean	nucleus	66.56	64.69
AT4G08790.1	Thale cress	plastid	63.67	64.5
CDY70138	Canola	plastid	61.74	64.43
CDX75139	Canola	plastid	60.45	63.09
Bra037878.1-P	Field mustard	plastid	62.06	59.2
TraesCS7A01G166700.1	Wheat	cytosol	21.54	28.88
TraesCS4A01G012200.1	Wheat	golgi, unclear	31.19	27.87
TraesCS5A01G024500.1	Wheat	cytosol	20.9	21.67
TraesCS5A01G284600.1	Wheat	golgi	20.26	15.33

Protein Annotations

EnsemblPlants:TraesCS5A01G108700.1	EnsemblPlantsGene:TraesCS5A01G108700	Gene3D:3.60.110.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536	GO:GO:0046686
InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	InterPro:IPR003010	InterPro:IPR036526	PANTHER:PTHR23088	PANTHER:PTHR23088:SF27
PFAM:PF00795	PFscan:PS50263	SUPFAM:SSF56317	TIGR:cd07572	MapMan:10.3.3.2.3	:

Description

No Description!

Coordinates

chr5A:-:195628886..195645061

Molecular Weight (calculated)

34084.8 Da

IEP (calculated)

7.794

GRAVY (calculated)

0.002

Length

311 amino acids

Sequence
(BLAST)

001: MALASFAVSP PIAACAAVLR RAMSFSSVSA ASQTRVGVVQ MTSVGDLDAN YATCSRLTKE AAAAGVKFLC FPEVFSFIGS KDGESVKLAE PLDGPIMQRY
101: CSLANESSIW LSLGGFQERG PDDSHQYNTH VLIDESGKVR SSYRKIHLFD VDVPGNMVYK ESRFTTAGDT VVAVDSPFGR LGLTVCYDLR FPELYQCLRF
201: KHQAQVLLVP SAFTKVTGEA HWEILLRARA IETQCYVIAA AQAGKHNEKR ESYGDSIIID PWGTVIARLP DRLSTGFAVA DIDLSKVEAV RTKMPISVHR
301: KFESIWKSSS L

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.