CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36253	Soybean	nucleus	88.15	79.06
PGSC0003DMT400060185	Potato	plastid	73.17	74.73
Solyc05g054940.2.1	Tomato	plastid	72.82	74.38
VIT_13s0067g03530.t01	Wine grape	plastid	73.87	65.23
CDY70138	Canola	plastid	67.25	64.77
GSMUA_Achr2P19050_001	Banana	cytosol	62.72	63.6
CDX75139	Canola	plastid	65.85	63.42
AT4G08790.1	Thale cress	plastid	67.6	63.19
TraesCS5A01G108700.1	Wheat	plastid	68.29	63.02
TraesCS5D01G121200.1	Wheat	plastid	65.85	62.58
Os12t0502500-01	Rice	plastid	67.6	60.06
Zm00001d023729_P005	Maize	plastid	65.85	58.51
Bra037878.1-P	Field mustard	plastid	66.2	58.28
EES16018	Sorghum	plastid	65.16	56.84
TraesCS5B01G114100.1	Wheat	plastid, unclear	67.25	56.76
KRH52237	Soybean	nucleus	27.87	22.73
KRH26651	Soybean	cytosol	20.91	20.07
KRH22668	Soybean	cytosol	20.91	20.07
KRH42198	Soybean	cytosol	20.56	19.73
KRG89323	Soybean	plastid	15.33	19.05
KRH49832	Soybean	cytosol	17.77	12.5

Protein Annotations

MapMan:10.3.3.2.3	Gene3D:3.60.110.10	EMBL:ACUP02012778	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	EnsemblPlantsGene:GLYMA_20G243100
GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526	UniProt:K7N5E3	EnsemblPlants:KRG93006	ProteinID:KRG93006
ProteinID:KRG93006.1	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF27	SUPFAM:SSF56317
UniParc:UPI000294C29A	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:47357647..47360112

Molecular Weight (calculated)

31540.8 Da

IEP (calculated)

5.600

GRAVY (calculated)

-0.032

Length

287 amino acids

Sequence
(BLAST)

001: MASNLAANMA TCSHLLKEAA SAGAKLLCFP EAFSYVGTMD GDSVLVAEPL DGPIMNHYCS LARESDIWLS LGGFQEIGSD PQHLCNTHVI VDDTGKIISS
101: YRKIHLFDVD VPGGRVYKES SFTESVLPQR NSLSRKSEGK GEGELDIVAV DSPIGRLGLS VCYDLRFPEM YQLLRFQHEA QVLLVPAAFT TVTGEAHWEI
201: LLRARVIETQ CYVIAAAQAG KHNDKRESYG NTLIIDPWGT IVGRLPDRLS TGIVVADIDL SFVDSVREKM PIAKQRKPID FWKAASL

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.