CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75139	Canola	plastid	98.32	98.32
Bra037878.1-P	Field mustard	plastid	98.32	89.88
AT4G08790.1	Thale cress	plastid	87.25	84.69
Solyc05g054940.2.1	Tomato	plastid	70.13	74.38
PGSC0003DMT400060185	Potato	plastid	69.46	73.67
KRG93006	Soybean	cytosol	64.77	67.25
GSMUA_Achr2P19050_001	Banana	cytosol	62.75	66.08
KRH36253	Soybean	nucleus	69.8	65.0
VIT_13s0067g03530.t01	Wine grape	plastid	69.8	64.0
TraesCS5D01G121200.1	Wheat	plastid	64.09	63.24
TraesCS5A01G108700.1	Wheat	plastid	64.43	61.74
Os12t0502500-01	Rice	plastid	65.1	60.06
Zm00001d023729_P005	Maize	plastid	63.76	58.82
EES16018	Sorghum	plastid	63.76	57.75
TraesCS5B01G114100.1	Wheat	plastid, unclear	64.09	56.18
CDX91177	Canola	cytosol, extracellular, nucleus	11.74	28.46
CDX78463	Canola	plastid	28.86	23.63
CDX70441	Canola	plastid	28.86	23.43
CDX91178	Canola	plastid	13.09	22.67
CDX97163	Canola	plastid	28.19	21.93
CDY30547	Canola	cytosol	20.13	20.2
CDX77117	Canola	cytosol	20.13	20.07
CDX69711	Canola	plastid	27.85	19.3
CDY18713	Canola	cytosol	19.8	14.46
CDX81223	Canola	cytosol	19.8	14.46
CDY58268	Canola	nucleus	18.79	13.73
CDX84520	Canola	cytosol	18.79	13.73
CDX71452	Canola	plastid	7.72	10.41

Protein Annotations

MapMan:10.3.3.2.3	Gene3D:3.60.110.10	GO:A0A078JRC9	UniProt:A0A078JRC9	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDY70138	ProteinID:CDY70138	ProteinID:CDY70138.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00096590001	InterPro:IPR003010
InterPro:IPR036526	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF27	SUPFAM:SSF56317
UniParc:UPI0004EEFFC3	SEG:seg	:	:	:	:

Description

BnaAnng32700DBnaAnng32700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRC9]

Coordinates

chrLK041272:-:569..3023

Molecular Weight (calculated)

33050.5 Da

IEP (calculated)

6.359

GRAVY (calculated)

-0.116

Length

298 amino acids

Sequence
(BLAST)

001: MNTWFASVDL TKASLSTQIP MATVKKTVRV AAAQMTSVND LMANFNTCSR LVQEAASAGA KLICFPENFS YMGEKSGDSV KIAESLDGPV MQRYCSLARD
101: TNMWLSLGGF QERFDDTHLY NTHVVIDDTG MIQSTYQKMH LFDVDVPGGS SYKESSFTVP GKNIVSVDSP VGRLGLTVCY DLRFPKIYQQ LRFDQKAQVI
201: LVPSAFTTVT GEAHWEILLR ARAIETQCYV IAASQAGKHN EKRESYGDTL IIDPWGSVVG RLPDRFSTGI TVADIDFSLL ESVRTKMPID KQRVSIDL

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.