CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70138	Canola	plastid	98.32	98.32
Bra037878.1-P	Field mustard	plastid	96.64	88.34
AT4G08790.1	Thale cress	plastid	85.91	83.39
Solyc05g054940.2.1	Tomato	plastid	69.13	73.31
PGSC0003DMT400060185	Potato	plastid	68.46	72.6
KRG93006	Soybean	cytosol	63.42	65.85
GSMUA_Achr2P19050_001	Banana	cytosol	61.41	64.66
KRH36253	Soybean	nucleus	68.46	63.75
VIT_13s0067g03530.t01	Wine grape	plastid	68.79	63.08
TraesCS5D01G121200.1	Wheat	plastid	62.75	61.92
TraesCS5A01G108700.1	Wheat	plastid	63.09	60.45
Os12t0502500-01	Rice	plastid	63.76	58.82
Zm00001d023729_P005	Maize	plastid	62.75	57.89
EES16018	Sorghum	plastid	62.75	56.84
TraesCS5B01G114100.1	Wheat	plastid, unclear	62.75	55.0
CDX91177	Canola	cytosol, extracellular, nucleus	11.41	27.64
CDX78463	Canola	plastid	28.52	23.35
CDX70441	Canola	plastid	28.52	23.16
CDX91178	Canola	plastid	13.09	22.67
CDX97163	Canola	plastid	27.85	21.67
CDY30547	Canola	cytosol	20.13	20.2
CDX77117	Canola	cytosol	20.13	20.07
CDX69711	Canola	plastid	27.18	18.84
CDY18713	Canola	cytosol	19.46	14.22
CDX81223	Canola	cytosol	19.46	14.22
CDY58268	Canola	nucleus	18.79	13.73
CDX84520	Canola	cytosol	18.79	13.73
CDX71452	Canola	plastid	8.05	10.86

Protein Annotations

EnsemblPlants:CDX75139	EnsemblPlantsGene:GSBRNA2T00118906001	Gene3D:3.60.110.10	GO:A0A078CGA9	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	InterPro:IPR003010	InterPro:IPR036526	PANTHER:PTHR23088
PANTHER:PTHR23088:SF27	PFAM:PF00795	PFscan:PS50263	ProteinID:CDX75139	ProteinID:CDX75139.1	SEG:seg
SUPFAM:SSF56317	UniParc:UPI0004EAE94C	MapMan:10.3.3.2.3	:	:	:

Description

BnaC09g25430D

Coordinates

chrLK031803:+:818809..820963

Molecular Weight (calculated)

32988.4 Da

IEP (calculated)

5.682

GRAVY (calculated)

-0.118

Length

298 amino acids

Sequence
(BLAST)

001: MNTCFASVDL TKASLSTQIP MATVKKTVRV AAAQMTSVND MMANFNTCSR LVQEAASAGA KLICFPENFS YMGEKSGDSV KIAESLDGPV MQRYCSLARD
101: TNMWLSLGGF QERFDDTHLY NTHVVIDDTG MIQSTYQKMH LFDVDVPGGS SYEESSFTVP GKNIVSVDSP VGRLGLTVCY DLRFPKIYQQ LRFDQKAQVI
201: LVPSAFTTVT GDAHWEILLR SRAIETQCYV IAASQAGKHN EKRESYGDTL IIDPWGSVVG RLPDRFSTGI TVADIDFSLL ESVRTKMPID KQRVSIDL

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.