CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037776.1-P	Field mustard	cytosol	99.26	99.26
CDX81223	Canola	cytosol	95.83	95.83
CDY58268	Canola	nucleus	92.4	92.4
AT5G64370.1	Thale cress	cytosol	92.4	92.4
CDX84520	Canola	cytosol	92.4	92.4
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	81.37	80.98
VIT_03s0017g00550.t01	Wine grape	cytosol	81.62	80.63
PGSC0003DMT400074637	Potato	cytosol	80.64	80.24
KRH49832	Soybean	cytosol	78.43	78.43
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	79.17	78.21
TraesCS5A01G284600.1	Wheat	golgi	78.68	78.1
TraesCS5D01G292000.1	Wheat	cytosol	78.43	77.86
Zm00001d021506_P001	Maize	extracellular, plasma membrane	78.92	77.78
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	78.68	77.72
TraesCS5B01G283800.2	Wheat	cytosol	77.94	77.37
GSMUA_Achr5P19870_001	Banana	cytosol	78.19	74.88
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	76.96	74.06
HORVU5Hr1G076080.1	Barley	mitochondrion	78.43	66.67
CDY30547	Canola	cytosol	20.59	28.28
CDX77117	Canola	cytosol	20.59	28.09
CDX91178	Canola	plastid	11.52	27.33
CDX78463	Canola	plastid	19.12	21.43
CDX97163	Canola	plastid	19.85	21.15
CDX70441	Canola	plastid	18.87	20.98
CDY70138	Canola	plastid	14.46	19.8
CDX75139	Canola	plastid	14.22	19.46
CDX69711	Canola	plastid	20.34	19.3
CDX91177	Canola	cytosol, extracellular, nucleus	5.64	18.7
CDX71452	Canola	plastid	9.56	17.65

Protein Annotations

Gene3D:3.60.110.10	MapMan:6.2.4.5	GO:A0A078G238	UniProt:A0A078G238	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDY18713	ProteinID:CDY18713	ProteinID:CDY18713.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00005797001	InterPro:IPR003010
InterPro:IPR036526	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF2	SUPFAM:SSF56317
UniParc:UPI0004EF45F9	SEG:seg	:	:	:	:

Description

BnaA09g06820DBnaA09g06820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G238]

Coordinates

chrLK032087:-:657741..659637

Molecular Weight (calculated)

45439.2 Da

IEP (calculated)

6.830

GRAVY (calculated)

-0.281

Length

408 amino acids

Sequence
(BLAST)

001: MNKSISDNGE TVAKGSICGY DSLDQLLSAN LKPELYQEVS RILLGSNCGR PLEHIVIPAS AKDLSSKHDF DLQAFSFSAD KEQMRKPRVV RVGLIQNSIA
101: LPTTAPFLDQ TRGIHNKLKP IIEAAGVAGV NILCLQEAWT MPFAFCTREK KWCEFAEPVD GESTKFLQEL AKKYNMVIVN PILERDMDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSCFVG
301: SINRVGTEVF PNAFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYR DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYLK PDFKPQVVSD
401: PMLHKNSS

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.