CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18713	Canola	cytosol	95.83	95.83
Bra037776.1-P	Field mustard	cytosol	95.59	95.59
CDX84520	Canola	cytosol	92.4	92.4
CDY58268	Canola	nucleus	91.91	91.91
AT5G64370.1	Thale cress	cytosol	91.67	91.67
VIT_03s0017g00550.t01	Wine grape	cytosol	82.11	81.11
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	81.37	80.98
PGSC0003DMT400074637	Potato	cytosol	80.64	80.24
KRH49832	Soybean	cytosol	78.92	78.92
TraesCS5A01G284600.1	Wheat	golgi	78.68	78.1
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	78.68	77.72
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	78.68	77.72
TraesCS5D01G292000.1	Wheat	cytosol	77.94	77.37
TraesCS5B01G283800.2	Wheat	cytosol	77.94	77.37
Zm00001d021506_P001	Maize	extracellular, plasma membrane	78.43	77.29
GSMUA_Achr5P19870_001	Banana	cytosol	77.94	74.65
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	76.96	74.06
HORVU5Hr1G076080.1	Barley	mitochondrion	78.43	66.67
CDY30547	Canola	cytosol	20.59	28.28
CDX77117	Canola	cytosol	20.59	28.09
CDX91178	Canola	plastid	11.52	27.33
CDX97163	Canola	plastid	20.1	21.41
CDX78463	Canola	plastid	18.87	21.15
CDX70441	Canola	plastid	18.63	20.71
CDY70138	Canola	plastid	14.46	19.8
CDX75139	Canola	plastid	14.22	19.46
CDX69711	Canola	plastid	20.1	19.07
CDX91177	Canola	cytosol, extracellular, nucleus	5.64	18.7
CDX71452	Canola	plastid	9.56	17.65

Protein Annotations

EnsemblPlants:CDX81223	EnsemblPlantsGene:GSBRNA2T00134690001	Gene3D:3.60.110.10	GO:A0A078D1K5	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	InterPro:IPR003010	InterPro:IPR036526	PANTHER:PTHR43674
PANTHER:PTHR43674:SF2	PFAM:PF00795	PFscan:PS50263	ProteinID:CDX81223	ProteinID:CDX81223.1	SEG:seg
SUPFAM:SSF56317	UniParc:UPI0004EDEADE	MapMan:6.2.4.5	:	:	:

Description

BnaC09g06340D

Coordinates

chrLK031824:+:185390..187582

Molecular Weight (calculated)

45475.1 Da

IEP (calculated)

6.392

GRAVY (calculated)

-0.289

Length

408 amino acids

Sequence
(BLAST)

001: MEKNISENGE AVANGSICGY DSLHQLLSEN LKPELYQEVS RILLGSNCGR PLEHIVLPDS AKSLSSKHGF DLQAVSFSAD EEQMRKPRVV RVGLIQNSIA
101: LPTTAPFLDQ TRGIHNKLKP IIEAAGVAGV NILCLQEAWT MPFAFCTREK KWCEFAEPVD GESTKFLQEL AKNYNMVIVN PILERDMDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNAFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYR DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYLK PDFKPQIVSD
401: PMLHKSSS

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.