Factsheet for GSMUA_Achr5P19870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	86.15	86.56
TraesCS5D01G292000.1	Wheat	cytosol	77.93	80.78
Zm00001d021506_P001	Maize	extracellular, plasma membrane	78.17	80.43
KRH49832	Soybean	cytosol	77.0	80.39
TraesCS5B01G283800.2	Wheat	cytosol	77.46	80.29
TraesCS5A01G284600.1	Wheat	golgi	77.46	80.29
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	77.46	79.9
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	77.46	79.9
VIT_03s0017g00550.t01	Wine grape	cytosol	76.53	78.93
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	75.82	78.78
Bra037776.1-P	Field mustard	cytosol	75.35	78.68
PGSC0003DMT400074637	Potato	cytosol	75.59	78.54
AT5G64370.1	Thale cress	cytosol	75.12	78.43
Bra024290.1-P	Field mustard	cytosol	74.88	78.19
CDY58268	Canola	nucleus	74.88	78.19
CDY18713	Canola	cytosol	74.88	78.19
CDX81223	Canola	cytosol	74.65	77.94
CDX84520	Canola	cytosol	73.71	76.96
HORVU5Hr1G076080.1	Barley	mitochondrion	77.7	68.96
GSMUA_Achr6P19390_001	Banana	cytosol	18.08	27.6
GSMUA_Achr1P21960_001	Banana	cytosol	16.67	23.13
GSMUA_Achr2P19050_001	Banana	cytosol	15.26	22.97
GSMUA_Achr1P12420_001	Banana	mitochondrion	19.01	22.63

Protein Annotations

Gene3D:3.60.110.10	MapMan:6.2.4.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSMUA_Achr5G19870_001
EnsemblPlants:GSMUA_Achr5P19870_001	EnsemblPlants:GSMUA_Achr5T19870_001	InterPro:IPR003010	InterPro:IPR036526	UniProt:M0T016	PFAM:PF00795
PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF2	SUPFAM:SSF56317	UniParc:UPI000294DC16	SEG:seg

Description

Beta-ureidopropionase [Source:GMGC_GENE;Acc:GSMUA_Achr5G19870_001]

Coordinates

chr5:-:21483249..21486608

Molecular Weight (calculated)

48049.3 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.298

Length

426 amino acids

Sequence
(BLAST)

001: MASHQRRDEN GRAAAEEEDG STTGSIHGFE SLHRLLEANL KPQIFQKKPI FFVLEVSRLL LGLNCGRHLE RVSLPQAATS LSAEHDFDLQ AFCFHADKEL
101: LRQPRIVRVG LIQNAIGLPT TAHFVDQKNA IRQKVEPMID AAGASGVNIL CLQEAWMMPF CFCTREKKWC EFAEPFDGES TQFLQEFARK YNMVIVNSIL
201: ERDIHHGETI WNTAVVIGNH GNIIGIHRKN HIPRVGDFNE STYYMEGNTG HPVFETAYGK IAVNICYGRH HPLNWLAFGL NGAEIVFNPS ATVGELSEPM
301: WPIEARNAAI ANSYFVGSIN RVGTEIFPNP FTSGDGKPQH SDFGHFYGSS HFSAPDASCT PSLSRYRDGL MVSDMDLNLC RQLKDKWGFR MTARYELYSE
401: MLAKYLKPDF TPQVIVDPML QKRNPL

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.