Factsheet for PGSC0003DMT400074637

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	99.02	99.02
VIT_03s0017g00550.t01	Wine grape	cytosol	82.93	82.32
AT5G64370.1	Thale cress	cytosol	81.46	81.86
Bra024290.1-P	Field mustard	cytosol	80.24	80.64
Bra037776.1-P	Field mustard	cytosol	80.24	80.64
CDX81223	Canola	cytosol	80.24	80.64
CDY18713	Canola	cytosol	80.24	80.64
CDY58268	Canola	nucleus	80.24	80.64
CDX84520	Canola	cytosol	79.27	79.66
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	79.76	79.18
KRH49832	Soybean	cytosol	78.54	78.92
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	78.78	78.21
TraesCS5A01G284600.1	Wheat	golgi	78.29	78.1
TraesCS5B01G283800.2	Wheat	cytosol	77.8	77.62
TraesCS5D01G292000.1	Wheat	cytosol	77.8	77.62
Zm00001d021506_P001	Maize	extracellular, plasma membrane	78.29	77.54
GSMUA_Achr5P19870_001	Banana	cytosol	78.54	75.59
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	76.59	74.06
HORVU5Hr1G076080.1	Barley	mitochondrion	78.05	66.67
PGSC0003DMT400067716	Potato	cytosol	21.46	29.33
PGSC0003DMT400013262	Potato	plastid	13.41	24.02
PGSC0003DMT400013266	Potato	plastid	16.59	22.3
PGSC0003DMT400060185	Potato	plastid	13.9	20.28
PGSC0003DMT400050357	Potato	cytosol	16.34	18.87

Protein Annotations

EntrezGene:102603227	Gene3D:3.60.110.10	MapMan:6.2.4.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810
InterPro:IPR003010	InterPro:IPR036526	UniProt:M1CTZ5	PFAM:PF00795	EnsemblPlantsGene:PGSC0003DMG400029019	PGSC:PGSC0003DMG400029019
EnsemblPlants:PGSC0003DMT400074637	PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF2	SUPFAM:SSF56317	UniParc:UPI000296BB27
RefSeq:XP_006359784.1	SEG:seg	:	:	:	:

Description

Beta-ureidopropionase [Source:PGSC_GENE;Acc:PGSC0003DMG400029019]

Coordinates

chr10:+:30509471..30512658

Molecular Weight (calculated)

45785.4 Da

IEP (calculated)

6.273

GRAVY (calculated)

-0.292

Length

410 amino acids

Sequence
(BLAST)

001: MEKREGEETE NGTTQEKGSI CGFDSLYHLL QTSLSPQLFQ EVNRILLGLN CGKKLESIAL PQPVKALSAN HDFDLQAFSF SADKESLRGP RIVRVGLIQN
101: SIALPTTEPF LNQREAIFQK LIPMIDAAGS SGVNILCLQE AWTMPFAFCT REKKWCEFAE EIDGESTKFL QQLAQKYNMV IISPILERDV NHGETLWNTA
201: VIIGNHGNII GKHRKNHIPR VGDFNESTYY MEGNTGHPVF ETAYGKIAVN ICYGRHHPLN WLAFGLNGAE IVFNPSATVG ELSEPMWPIE ARNAAIANSY
301: FVGSINRVGT EVFPNPFTSG DGKPQHADFG HFYGSSHFSA PDASCTPSLA RHKDGLLISD MDLNLCRQLK DKWGFRMTAR YDVYADLLGR YVKQDFEPQV
401: ISDPLLHKSA

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.