Factsheet for PGSC0003DMT400060185

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g054940.2.1	Tomato	plastid	96.8	96.8
VIT_13s0067g03530.t01	Wine grape	plastid	85.05	73.54
KRG93006	Soybean	cytosol	74.73	73.17
AT4G08790.1	Thale cress	plastid	76.87	70.36
KRH36253	Soybean	nucleus	79.36	69.69
CDY70138	Canola	plastid	73.67	69.46
GSMUA_Achr2P19050_001	Banana	cytosol	69.04	68.55
CDX75139	Canola	plastid	72.6	68.46
TraesCS5D01G121200.1	Wheat	plastid	70.11	65.23
TraesCS5A01G108700.1	Wheat	plastid	71.17	64.31
Bra037878.1-P	Field mustard	plastid	74.02	63.8
Os12t0502500-01	Rice	plastid	71.53	62.23
Zm00001d023729_P005	Maize	plastid	69.39	60.37
EES16018	Sorghum	plastid	68.68	58.66
TraesCS5B01G114100.1	Wheat	plastid, unclear	70.11	57.94
PGSC0003DMT400013262	Potato	plastid	19.57	24.02
PGSC0003DMT400013266	Potato	plastid	24.56	22.62
PGSC0003DMT400067716	Potato	cytosol	23.84	22.33
PGSC0003DMT400050357	Potato	cytosol	27.76	21.97
PGSC0003DMT400074637	Potato	cytosol	20.28	13.9

Protein Annotations

MapMan:10.3.3.2.3	Gene3D:3.60.110.10	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	GO:GO:0009536	GO:GO:0016787	GO:GO:0016810	GO:GO:0046686	InterPro:IPR003010
InterPro:IPR036526	UniProt:M1C5D1	PFAM:PF00795	EnsemblPlantsGene:PGSC0003DMG400023411	PGSC:PGSC0003DMG400023411	EnsemblPlants:PGSC0003DMT400060185
PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF27	SUPFAM:SSF56317	UniParc:UPI0002956B05	:

Description

Nitrilase and fragile histidine triad fusion protein [Source:PGSC_GENE;Acc:PGSC0003DMG400023411]

Coordinates

chr5:-:50650223..50656877

Molecular Weight (calculated)

30793.6 Da

IEP (calculated)

5.897

GRAVY (calculated)

-0.083

Length

281 amino acids

Sequence
(BLAST)

001: MANSVRIAAA QMTSVNNLGV NFATCSRLVK EAASAGAKLL CFPENFSFVG DLEGESLTVA EPLDGPIMNG YCSLARESNI WLSLGGFQEK GSDDAHLRNT
101: HVLIDDNGNI RSTYSKMHLF DVDVPGGAVY KESSFTEAGK DIVVVDSPFG RLGVTVCYDL RFPELYQQLR FNHDAQVLLV PAAFTMVTGQ AHWEILLRAR
201: AIETQCYVIA AAQAGKHNDK RESYGDTLII DPWGTIVGRL SDRSSTGITV ADIDFSLIDS VRAKMPVSKH RKPAEFWNRS V

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.