Factsheet for TraesCS5B01G114100.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, unclear
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G121200.1	Wheat	plastid	87.06	98.01
TraesCS5A01G108700.1	Wheat	plastid	89.41	97.75
Os12t0502500-01	Rice	plastid	82.06	86.38
Zm00001d023729_P005	Maize	plastid	79.71	83.9
EES16018	Sorghum	plastid	80.29	82.98
GSMUA_Achr2P19050_001	Banana	cytosol	61.18	73.5
PGSC0003DMT400060185	Potato	plastid	57.94	70.11
Solyc05g054940.2.1	Tomato	plastid	57.35	69.39
KRG93006	Soybean	cytosol	56.76	67.25
VIT_13s0067g03530.t01	Wine grape	plastid	62.35	65.23
CDY70138	Canola	plastid	56.18	64.09
KRH36253	Soybean	nucleus	60.29	64.06
AT4G08790.1	Thale cress	plastid	57.35	63.52
CDX75139	Canola	plastid	55.0	62.75
Bra037878.1-P	Field mustard	plastid	56.47	58.9
TraesCS4B01G292100.1	Wheat	plastid	28.82	28.16
TraesCS7B01G071000.1	Wheat	cytosol, extracellular, mitochondrion, plastid	23.53	27.78
TraesCS7B01G071300.1	Wheat	cytosol, extracellular, mitochondrion, plastid	22.35	26.48
TraesCS5B01G022300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.82	21.26
TraesCS5B01G283800.2	Wheat	cytosol	19.12	15.82

Protein Annotations

MapMan:10.3.3.2.3	Gene3D:3.60.110.10	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536
GO:GO:0046686	InterPro:IPR003010	InterPro:IPR036526	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR23088
PANTHER:PTHR23088:SF27	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS5B01G114100	EnsemblPlants:TraesCS5B01G114100.1	TIGR:cd07572	SEG:seg

Description

No Description!

Coordinates

chr5B:+:184750049..184785853

Molecular Weight (calculated)

36901.0 Da

IEP (calculated)

8.058

GRAVY (calculated)

-0.073

Length

340 amino acids

Sequence
(BLAST)

001: MRPRGISSSA VGSCPRAGDP GGWASTSPVM ALASFAVSPP TAASAAVLRR AMSFSSVSAA SQARVGVVQM TSVGDLDANY ATCSRLTKEA AAAGVKFLCF
101: PEVFSFIGSK DGESVKLAEP LDGPIMQRYC SLANESSMWL SLGGFQERGP DDSHQYNTHI LIDESGKVRS SYRKIHLFDV DVPGNMVYKE SRFTTAGDTV
201: VAVDSPFGRL GLTVCYDLRF PELYQCLRFK HQAQVLLVPS AFTKVTGEAH WEILLRARAI ETQCYVIAAA QAGKHNEKRE SYGDSIVIDP WGTVIARLPD
301: RLSTGFAVAD IDLSKVEAVR TKMPISEHRK FESIWKSSSL

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.