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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:
  • mitochondrion 3
  • cytosol 1
  • plastid 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, mitochondrion, plastid
Any Predictor:cytosol, extracellular, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G166700.1 Wheat cytosol 77.0 95.26
HORVU7Hr1G034840.14 Barley cytosol 77.7 91.77
TraesCS7B01G071000.1 Wheat cytosol, extracellular, mitochondrion, plastid 91.99 91.67
TraesCS7D01G167300.1 Wheat plastid 91.99 91.03
KXG19560 Sorghum cytosol 79.79 75.33
Os06t0206000-00 Rice cytosol, mitochondrion, plastid 70.38 62.15
PGSC0003DMT400013262 Potato plastid 43.21 54.15
PGSC0003DMT400013266 Potato plastid 55.05 51.8
Solyc06g064880.2.1 Tomato plastid 54.36 51.15
TraesCS4B01G292100.1 Wheat plastid 61.32 50.57
TraesCS5B01G022300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 23.69 22.59
TraesCS5B01G114100.1 Wheat plastid, unclear 26.48 22.35
TraesCS5B01G283800.2 Wheat cytosol 24.39 17.03
Protein Annotations
EnsemblPlants:TraesCS7B01G071300.1EnsemblPlantsGene:TraesCS7B01G071300Gene3D:3.60.110.10GO:GO:0006807GO:GO:0008150GO:GO:0008152
InterPro:C-N_HydrolaseInterPro:C-N_Hydrolase_sfInterPro:IPR003010InterPro:IPR036526PANTHER:PTHR23088PANTHER:PTHR23088:SF23
PFAM:PF00795PFscan:PS50263SEG:segSUPFAM:SSF56317TIGR:cd07572MapMan:4.1.2.1.4
Description
No Description!
Coordinates
chr7B:+:78320955..78322810
Molecular Weight (calculated)
31099.4 Da
IEP (calculated)
5.378
GRAVY (calculated)
0.027
Length
287 amino acids
Sequence
(BLAST)
001: MARVQYKIAL CQLLVTPDKH GNIARARARI EAAAAAGAKL VVLPEIWNCP YAMETMRSYA EDIDGGRSPS VSMLSEVAAA RKITIVGGSV PEMASGQLFN
101: TCCVVGPDGE IKAKHRKLHL FGIDIPGDIT FRESDTFTAG QEPTVVDTDV GRIGIGICHD IRFPELAMLY RSRGAHLICY PSAFNMSTGQ LLWDLMQKSR
201: VIDNQLFVVT CSPARDPNSK SDFVVWGNSS LIGPFGEVLA AAGHEDATVI GEVDLCSIDA VRANLPLETQ GRGDLYRLVD IERECSS
Best Arabidopsis Sequence Match ( AT5G12040.1 )
(BLAST)
001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
Arabidopsis Description
NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.