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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 2
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, mitochondrion, plastid
Any Predictor:cytosol, extracellular, mitochondrion, plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G166700.1 Wheat cytosol 77.08 95.69
HORVU7Hr1G034840.14 Barley cytosol 79.17 93.83
TraesCS7D01G167300.1 Wheat plastid 94.1 93.45
TraesCS7B01G071300.1 Wheat cytosol, extracellular, mitochondrion, plastid 91.67 91.99
KXG19560 Sorghum cytosol 79.17 75.0
Os06t0206000-00 Rice cytosol, mitochondrion, plastid 69.1 61.23
PGSC0003DMT400013262 Potato plastid 42.71 53.71
TraesCS4B01G292100.1 Wheat plastid 63.19 52.3
PGSC0003DMT400013266 Potato plastid 55.21 52.13
Solyc06g064880.2.1 Tomato plastid 54.51 51.48
TraesCS5B01G114100.1 Wheat plastid, unclear 27.78 23.53
TraesCS5B01G022300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 22.92 21.93
TraesCS5B01G283800.2 Wheat cytosol 25.35 17.76
Protein Annotations
EnsemblPlants:TraesCS7B01G071000.1EnsemblPlantsGene:TraesCS7B01G071000Gene3D:3.60.110.10GO:GO:0006807GO:GO:0008150GO:GO:0008152
InterPro:C-N_HydrolaseInterPro:C-N_Hydrolase_sfInterPro:IPR003010InterPro:IPR036526PANTHER:PTHR23088PANTHER:PTHR23088:SF23
PFAM:PF00795PFscan:PS50263SEG:segSUPFAM:SSF56317TIGR:cd07572MapMan:4.1.2.1.4
Description
No Description!
Coordinates
chr7B:+:78227126..78228968
Molecular Weight (calculated)
31130.4 Da
IEP (calculated)
5.156
GRAVY (calculated)
0.017
Length
288 amino acids
Sequence
(BLAST)
001: MPQVAQYKIA LCQLPVTADK HGNIARARAR IDAAAAAGAK LVVLPEIWNC PYAMETMPSY AEDIDGGRSP SVSMLSEVAA ARKITIVGGS VPEMASGQLF
101: NTCCVVGPDG EIKAKHRKLH LFGIDIPGDI TFREFDTFTA GQEPTVVDTD VGRIGIGICH DIRFPELAML YRSRGAHLIC YPSAFNMSTG QLLWDLMQKS
201: RAVDNQLFVA TCSPARDPNS PSEFVLWGNS SLIAPFGEVL AAAGHEDATV IGEIDLSLVE AVRANLPLET QGRGDLYRLI DVQRERSS
Best Arabidopsis Sequence Match ( AT5G12040.1 )
(BLAST)
001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
Arabidopsis Description
NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.