Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G166700.1 | Wheat | cytosol | 76.55 | 95.69 |
| HORVU7Hr1G034840.14 | Barley | cytosol | 78.97 | 94.24 |
| TraesCS7B01G071000.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 93.45 | 94.1 |
| TraesCS7B01G071300.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 91.03 | 91.99 |
| KXG19560 | Sorghum | cytosol | 80.0 | 76.32 |
| Os06t0206000-00 | Rice | cytosol, mitochondrion, plastid | 68.62 | 61.23 |
| PGSC0003DMT400013262 | Potato | plastid | 42.07 | 53.28 |
| PGSC0003DMT400013266 | Potato | plastid | 55.86 | 53.11 |
| Solyc06g064880.2.1 | Tomato | plastid | 55.17 | 52.46 |
| TraesCS4D01G290800.1 | Wheat | plastid | 62.41 | 52.16 |
| TraesCS5D01G121200.1 | Wheat | plastid | 26.55 | 25.5 |
| TraesCS5D01G031200.1 | Wheat | golgi | 22.76 | 21.93 |
| TraesCS5D01G292000.1 | Wheat | cytosol | 24.48 | 17.27 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G167300.1 | EnsemblPlantsGene:TraesCS7D01G167300 | Gene3D:3.60.110.10 | GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:C-N_Hydrolase | InterPro:C-N_Hydrolase_sf | InterPro:IPR003010 | InterPro:IPR036526 | PANTHER:PTHR23088 | PANTHER:PTHR23088:SF23 |
| PFAM:PF00795 | PFscan:PS50263 | SEG:seg | SUPFAM:SSF56317 | TIGR:cd07572 | MapMan:4.1.2.1.4 |
Description
No Description!
Coordinates
chr7D:+:117748893..117750679
Molecular Weight (calculated)
31447.7 Da
IEP (calculated)
5.171
GRAVY (calculated)
-0.017
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQAAQYKIA LCQLPVTADK HGNIARARAR IEAAAAAGAE LVVLPEIWSC PYAMQTMRSY AEDIDGGRSP SVSMLSEVAA ARKITIVGGS IPEMVPASGQ
101: LFNTCCVVGP DGEIKAKHRK LHLFGIDIPR DITFRESDTF TAGQEPTVVD TDVGRIGIGI CHDIRFPELA MLYRSRGAHL ICYPSAFNMS TGQLLWDLMQ
201: KSRAVDNQLF VATCSPARDP NSQSDFVVWG NSSLIGPFGE VLAAAGHEDA TVIGEIDLCL IEAVRESLPL ETQGRGDLYR LIDVQRERSS
101: LFNTCCVVGP DGEIKAKHRK LHLFGIDIPR DITFRESDTF TAGQEPTVVD TDVGRIGIGI CHDIRFPELA MLYRSRGAHL ICYPSAFNMS TGQLLWDLMQ
201: KSRAVDNQLF VATCSPARDP NSQSDFVVWG NSSLIGPFGE VLAAAGHEDA TVIGEIDLCL IEAVRESLPL ETQGRGDLYR LIDVQRERSS
001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
Arabidopsis Description
NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.