Factsheet for TraesCS5D01G121200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G108700.1	Wheat	plastid	98.01	95.18
TraesCS5B01G114100.1	Wheat	plastid, unclear	98.01	87.06
Os12t0502500-01	Rice	plastid	89.74	83.9
EES16018	Sorghum	plastid	89.74	82.37
Zm00001d023729_P005	Maize	plastid	88.08	82.35
GSMUA_Achr2P19050_001	Banana	cytosol	69.21	73.85
PGSC0003DMT400060185	Potato	plastid	65.23	70.11
Solyc05g054940.2.1	Tomato	plastid	64.57	69.39
KRG93006	Soybean	cytosol	62.58	65.85
CDY70138	Canola	plastid	63.24	64.09
VIT_13s0067g03530.t01	Wine grape	plastid	68.54	63.69
AT4G08790.1	Thale cress	plastid	64.57	63.52
CDX75139	Canola	plastid	61.92	62.75
KRH36253	Soybean	nucleus	66.23	62.5
Bra037878.1-P	Field mustard	plastid	63.58	58.9
TraesCS4D01G290800.1	Wheat	plastid	30.79	26.8
TraesCS7D01G167300.1	Wheat	plastid	25.5	26.55
TraesCS5D01G031200.1	Wheat	golgi	21.19	21.26
TraesCS5D01G292000.1	Wheat	cytosol	20.86	15.33

Protein Annotations

MapMan:10.3.3.2.3	Gene3D:3.60.110.10	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536
GO:GO:0046686	InterPro:IPR003010	InterPro:IPR036526	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR23088
PANTHER:PTHR23088:SF27	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS5D01G121200	EnsemblPlants:TraesCS5D01G121200.1	TIGR:cd07572	:

Description

No Description!

Coordinates

chr5D:-:173750295..173764068

Molecular Weight (calculated)

33242.8 Da

IEP (calculated)

7.150

GRAVY (calculated)

-0.013

Length

302 amino acids

Sequence
(BLAST)

001: MALASFAVSP PIAAVLRRAM SFSSVSAASQ ARVGVVQMTS VGDLDANYAT CSRLTKEAAA AGVKFLCFPE VFSFIGSKDG ESVKLAEPLD GPIMQRYCSL
101: ANESSMWLSL GGFQERGPDD SHQYNTHVLI DESGKVRSSY RKIHLFDVDV PGNMVYKESR FTTAGDTVVV VDSPFGRLGL TVCYDLRFPE LYQCLRFKHQ
201: AQVLLVPSAF TKVTGEAHWE ILLRARAIET QCYVIAAAQA GKHNEKRESY GDSIIIDPWG TVIARLPDRL FTGFAVADID LSKVEAVRSK MPISEHRKFE
301: SI

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.