Factsheet for Solyc05g054940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
plasma membrane 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060185	Potato	plastid	96.8	96.8
VIT_13s0067g03530.t01	Wine grape	plastid	84.34	72.92
KRG93006	Soybean	cytosol	74.38	72.82
AT4G08790.1	Thale cress	plastid	76.87	70.36
CDY70138	Canola	plastid	74.38	70.13
KRH36253	Soybean	nucleus	79.36	69.69
CDX75139	Canola	plastid	73.31	69.13
GSMUA_Achr2P19050_001	Banana	cytosol	69.39	68.9
TraesCS5D01G121200.1	Wheat	plastid	69.39	64.57
Bra037878.1-P	Field mustard	plastid	74.73	64.42
TraesCS5A01G108700.1	Wheat	plastid	70.46	63.67
Os12t0502500-01	Rice	plastid	71.17	61.92
Zm00001d023729_P005	Maize	plastid	68.68	59.75
EES16018	Sorghum	plastid	67.97	58.05
TraesCS5B01G114100.1	Wheat	plastid, unclear	69.39	57.35
Solyc06g064880.2.1	Tomato	plastid	24.91	22.95
Solyc08g062190.2.1	Tomato	plastid	29.18	22.1
Solyc07g041280.2.1	Tomato	plastid	28.47	22.1
Solyc11g068540.1.1	Tomato	endoplasmic reticulum, extracellular	23.49	22.0
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	20.28	13.9

Protein Annotations

MapMan:10.3.3.2.3	Gene3D:3.60.110.10	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	GO:GO:0009536	GO:GO:0016787	GO:GO:0016810	GO:GO:0046686	InterPro:IPR003010
InterPro:IPR036526	UniProt:K4C2H1	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF27
SUPFAM:SSF56317	EnsemblPlantsGene:Solyc05g054940.2	EnsemblPlants:Solyc05g054940.2.1	UniParc:UPI0002766E98	:	:

Description

No Description!

Coordinates

chr5:-:64730419..64736918

Molecular Weight (calculated)

30805.7 Da

IEP (calculated)

6.394

GRAVY (calculated)

-0.088

Length

281 amino acids

Sequence
(BLAST)

001: MANSVRIAAA QMTSVNNLAV NFGTCSRLVK EAASAGAKLL CFPENFSFVG DLEGESLKIA EPLDGPIMKG YCSLARESNI WLSLGGFQEK GSDNAHLRNT
101: HVLIDDNGNI RSTYSKMHLF DVDVPGGAVY KESSFTEAGK DIVVVDSPFG RLGVTVCYDL RFPELYQQLR FNHDAQVLLV PAAFTTVTGQ AHWEILLRAR
201: AIETQCYVIA AAQAGKHNDK RESYGDTLII DPWGTIVGRL SDRSSTGITV ADIDFSLIDS VRAKMPVCKH RKPAEFWNQS V

Best Arabidopsis Sequence Match ( AT4G08790.1 )
(BLAST)

001: MNAYSVSLDF TKPSLFTRIT LSSQIPLTMA TTVNKTVRVA AAQMTSVNDL MTNFATCSRL VQEAALAGAK LICFPENFSF VGDKEGESVK IAEPLDGPVM
101: ERYCSLARDS NIWLSLGGFQ ERFDDTHLCN THVVIDDAGM IRDTYQKMHL FDVDVPGGSS YKESSFTVPG TKIVSVDSPV GRLGLTVCYD LRFPKIYQQL
201: RFEQKAQVLL VPSAFTKVTG EAHWEILLRA RAIETQCYVI AAAQAGKHNE KRESYGDTLI IDPWGTVVGR LPDRVSTGIV VADIDFSLID SVRTKMPIDK
301: QRVSIDL

Arabidopsis Description

NLP2Nitrilase-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.