Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 1
- plasma membrane 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013266 | Potato | plastid | 97.38 | 73.11 |
| Solyc06g064880.2.1 | Tomato | plastid | 93.01 | 69.84 |
| TraesCS7B01G071300.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 54.15 | 43.21 |
| TraesCS7B01G071000.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 53.71 | 42.71 |
| TraesCS7D01G167300.1 | Wheat | plastid | 53.28 | 42.07 |
| HORVU7Hr1G034840.14 | Barley | cytosol | 43.23 | 40.74 |
| TraesCS7A01G166700.1 | Wheat | cytosol | 40.61 | 40.09 |
| KXG19560 | Sorghum | cytosol | 49.78 | 37.5 |
| PGSC0003DMT400050357 | Potato | cytosol | 55.9 | 36.06 |
| Os06t0206000-00 | Rice | cytosol, mitochondrion, plastid | 45.41 | 32.0 |
| PGSC0003DMT400060185 | Potato | plastid | 24.02 | 19.57 |
| PGSC0003DMT400067716 | Potato | cytosol | 22.71 | 17.33 |
| PGSC0003DMT400074637 | Potato | cytosol | 24.02 | 13.41 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400013262 | EnsemblPlantsGene:PGSC0003DMG401005180 | Gene3D:3.60.110.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016810 | InterPro:C-N_Hydrolase | InterPro:C-N_Hydrolase_sf |
| InterPro:IPR003010 | InterPro:IPR036526 | PANTHER:PTHR23088 | PANTHER:PTHR23088:SF23 | PFAM:PF00795 | PFscan:PS50263 |
| PGSC:PGSC0003DMG401005180 | SUPFAM:SSF56317 | UniParc:UPI000294D9C6 | UniProt:M1A2K8 | MapMan:4.1.2.1.4 | : |
Description
Carbon-nitrogen hydrolase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG401005180]
Coordinates
chr6:-:47254303..47256963
Molecular Weight (calculated)
24730.6 Da
IEP (calculated)
4.893
GRAVY (calculated)
-0.021
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVAVQSFV SAPLQVPKVT QFKIGICQLK VTTEKSANIF NARSMIQAAA EQGASLILLP EMWNCPYSTD LFAKFAEDFS DIDSAPSLLM LSEVASSLGV
101: TIIGGSIPEK DAGQLYNSCP VFGPNGELKA KHRKIHLFDM GKPLPGEVQF KESDNISAGE KPTVVDTDCG RIGIGICHDI RFPELAMSYS ARGAHLVCYP
201: GAFNMSTGAT LWELEQRTRQ DDSVSCSCE
101: TIIGGSIPEK DAGQLYNSCP VFGPNGELKA KHRKIHLFDM GKPLPGEVQF KESDNISAGE KPTVVDTDCG RIGIGICHDI RFPELAMSYS ARGAHLVCYP
201: GAFNMSTGAT LWELEQRTRQ DDSVSCSCE
001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
Arabidopsis Description
NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.