CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g00550.t01	Wine grape	cytosol	82.35	81.36
AT5G64370.1	Thale cress	cytosol	79.41	79.41
CDX81223	Canola	cytosol	78.92	78.92
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	79.17	78.78
PGSC0003DMT400074637	Potato	cytosol	78.92	78.54
Bra024290.1-P	Field mustard	cytosol	78.43	78.43
Bra037776.1-P	Field mustard	cytosol	78.43	78.43
CDY18713	Canola	cytosol	78.43	78.43
CDY58268	Canola	nucleus	78.43	78.43
CDX84520	Canola	cytosol	78.19	78.19
TraesCS5D01G292000.1	Wheat	cytosol	78.68	78.1
TraesCS5A01G284600.1	Wheat	golgi	78.43	77.86
TraesCS5B01G283800.2	Wheat	cytosol	78.19	77.62
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	78.19	77.24
Zm00001d021506_P001	Maize	extracellular, plasma membrane	78.19	77.05
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	77.94	77.0
GSMUA_Achr5P19870_001	Banana	cytosol	80.39	77.0
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	77.7	74.76
HORVU5Hr1G076080.1	Barley	mitochondrion	78.43	66.67
KRH26651	Soybean	cytosol	20.83	28.43
KRH42198	Soybean	cytosol	20.34	27.76
KRH22668	Soybean	cytosol	20.34	27.76
KRH52237	Soybean	nucleus	19.85	23.01
KRG89323	Soybean	plastid	12.75	22.51
KRH36253	Soybean	nucleus	14.46	18.44
KRG93006	Soybean	cytosol	12.5	17.77

Protein Annotations

EntrezGene:100792563	Gene3D:3.60.110.10	MapMan:6.2.4.5	EMBL:ACUP02004645	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlantsGene:GLYMA_07G182100	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016810	UniProt:I1KL55	InterPro:IPR003010	InterPro:IPR036526	EnsemblPlants:KRH49832
ProteinID:KRH49832	ProteinID:KRH49832.1	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF2
SUPFAM:SSF56317	UniParc:UPI0002337D6D	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:35011981..35015628

Molecular Weight (calculated)

45596.1 Da

IEP (calculated)

6.453

GRAVY (calculated)

-0.279

Length

408 amino acids

Sequence
(BLAST)

001: MEKPQNGEEK EETTASFCGY DSLHRLLKDN LNPHHFQEVS RLLTGLNCGK ALEAVSLPES ATSLSAEHGF DIQAFSFCAD KELLREPRIV RVGLIQNSIV
101: LPTTAHFADQ KKAIFEKLKP IIEAAGSSGV NVLCLQEAWM MPFAFCTREK RWCEFAEPVD GESTKFLQSF ALKYNMVIVS PILERDINHG EVIWNTAVVI
201: GNHGNIIGKH RKNHIPRVGD FNESTYYMEG NTGHPVFETA FGKIAINICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVA
301: SINRVGTETF PNQFTSGDGK PAHADFGHFY GSSYVSAPDA SCTPSLSRNR DGLLVTDMDL NLCRQVKDKW GFRMTSRYEL YADTLARYVK PDFEPQVTSD
401: PLLHRKSL

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.