CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58268	Canola	nucleus	96.32	96.32
AT5G64370.1	Thale cress	cytosol	92.4	92.4
CDX81223	Canola	cytosol	92.4	92.4
CDY18713	Canola	cytosol	92.4	92.4
VIT_03s0017g00550.t01	Wine grape	cytosol	81.13	80.15
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	80.15	79.76
PGSC0003DMT400074637	Potato	cytosol	79.66	79.27
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	79.17	78.21
KRH49832	Soybean	cytosol	78.19	78.19
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	78.92	77.97
TraesCS5A01G284600.1	Wheat	golgi	78.19	77.62
TraesCS5D01G292000.1	Wheat	cytosol	77.94	77.37
Zm00001d021506_P001	Maize	extracellular, plasma membrane	78.19	77.05
TraesCS5B01G283800.2	Wheat	cytosol	77.45	76.89
GSMUA_Achr5P19870_001	Banana	cytosol	76.96	73.71
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	75.74	72.88
HORVU5Hr1G076080.1	Barley	mitochondrion	77.94	66.25
CDY30547	Canola	cytosol	20.34	27.95
CDX91178	Canola	plastid	11.76	27.91
CDX77117	Canola	cytosol	20.34	27.76
CDX78463	Canola	plastid	18.63	20.88
CDX70441	Canola	plastid	18.38	20.44
CDX97163	Canola	plastid	19.12	20.37
CDX69711	Canola	plastid	19.85	18.84
CDY70138	Canola	plastid	13.73	18.79
CDX75139	Canola	plastid	13.73	18.79
CDX91177	Canola	cytosol, extracellular, nucleus	5.39	17.89
CDX71452	Canola	plastid	9.31	17.19

Protein Annotations

EnsemblPlants:CDX84520	EnsemblPlantsGene:GSBRNA2T00141754001	Gene3D:3.60.110.10	GO:A0A078D606	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	InterPro:IPR003010	InterPro:IPR036526	PANTHER:PTHR43674
PANTHER:PTHR43674:SF2	PFAM:PF00795	PFscan:PS50263	ProteinID:CDX84520	ProteinID:CDX84520.1	SEG:seg
SUPFAM:SSF56317	UniParc:UPI0004EEAB8E	MapMan:6.2.4.5	:	:	:

Description

BnaC03g49800D

Coordinates

chrLK031837:+:1586301..1588146

Molecular Weight (calculated)

45533.2 Da

IEP (calculated)

6.644

GRAVY (calculated)

-0.309

Length

408 amino acids

Sequence
(BLAST)

001: MDKSISANGE TTADGSIRGY DSLHQLLSSN LKPELYQEVS RLLLGSNCGR SLEQIVLPDS AKALSSKHDF DLQAVSFSAD EEQMRKPRVV RVGLVQNSIA
101: LPTTAPFSDQ KRGIFEKLKP IIHAAGVAGV NILCLQEAWT MPFAFCTREK KWCEFAEPID GESTKFLQEL AKKYNMVIVS PILERDMDHG EVLWNTAVII
201: GNNGKIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNAFTSGDGK PQHNDFGHFY GSSYFSAPDA SCTPSLSRCR DGLMISDMDL NLCRQYKDKW GFRMTARYEV YADLLDKYIK PEFKPQVVSD
401: PMLHKNSS

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.