Factsheet for Zm00001d021506_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

cytosol 1
mitochondrion 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	peroxisome

extracellular: 20408568
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	96.86	97.09
TraesCS5D01G292000.1	Wheat	cytosol	89.61	90.27
TraesCS5A01G284600.1	Wheat	golgi	89.61	90.27
TraesCS5B01G283800.2	Wheat	cytosol	89.37	90.02
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	88.16	88.38
AT5G64370.1	Thale cress	cytosol	78.74	79.9
Bra024290.1-P	Field mustard	cytosol	78.26	79.41
CDY58268	Canola	nucleus	78.26	79.41
VIT_03s0017g00550.t01	Wine grape	cytosol	78.99	79.18
Bra037776.1-P	Field mustard	cytosol	78.02	79.17
CDY18713	Canola	cytosol	77.78	78.92
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	77.78	78.54
CDX81223	Canola	cytosol	77.29	78.43
PGSC0003DMT400074637	Potato	cytosol	77.54	78.29
KRH49832	Soybean	cytosol	77.05	78.19
CDX84520	Canola	cytosol	77.05	78.19
GSMUA_Achr5P19870_001	Banana	cytosol	80.43	78.17
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	79.95	78.07
HORVU5Hr1G076080.1	Barley	mitochondrion	90.1	77.71
Zm00001d016704_P001	Maize	extracellular	21.26	29.33
Zm00001d023729_P005	Maize	plastid	16.18	20.74
Zm00001d027876_P004	Maize	plastid	18.84	17.93
Zm00001d048292_P003	Maize	plastid	16.91	16.43

Protein Annotations

EntrezGene:100283449	Gene3D:3.60.110.10	MapMan:6.2.4.5	UniProt:B4FSZ8	EMBL:BT040236	InterPro:C-N_Hydrolase
InterPro:C-N_Hydrolase_sf	EMBL:EU964791	GO:GO:0003674	GO:GO:0003824	GO:GO:0003837	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006212
GO:GO:0006807	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	GO:GO:0016787	GO:GO:0016810	GO:GO:0043562	InterPro:IPR003010
InterPro:IPR036526	ProteinID:ONM57351.1	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF2
SUPFAM:SSF56317	UniParc:UPI00017B7DAD	EnsemblPlantsGene:Zm00001d021506	EnsemblPlants:Zm00001d021506_P001	EnsemblPlants:Zm00001d021506_T001	SEG:seg

Description

beta alanine synthase1

Coordinates

chr7:-:154416323..154419080

Molecular Weight (calculated)

45770.4 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.218

Length

414 amino acids

Sequence
(BLAST)

001: MATSNGSGVA QGEEGKTPPP AGSIGGYESL HRLLEANLSP DLFQEASRLL LGLNCARPLE AISLPDATTT LAETHSFDLQ AFRFSADKEF LRQSRVVRVG
101: LIQNSIAVPT TCHFADQKKA IMDKIKPLID AAGASGVNIM CLQEAWTMPF AFCTREKRWC EFAEPVDGES TQFLQELAQK YNMVIVSPIL ERDINHGETI
201: WNTAVVIGNN GNIIGIHRKN HIPRVGDFNE STYYMEGNTG HPVFETAYGK IGVNICYGRH HPLNWLAFGL NGAEIVFNPS ATVGELSEPM WPIEARNAAI
301: ANSYFVGSIN RVGTEVFPNP FTSGDGKPQH ADFGHFYGSS HFSAPDASCT PSLSRYRDGL IISDMDLNLC RQIKDKWAFR MTARYEMYAS LLSEYLKPDF
401: KPQVIVDPLI NKKA

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.