Factsheet for Bra024290.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58268	Canola	nucleus	99.51	99.51
AT5G64370.1	Thale cress	cytosol	92.89	92.89
Bra037776.1-P	Field mustard	cytosol	92.16	92.16
VIT_03s0017g00550.t01	Wine grape	cytosol	82.35	81.36
Solyc10g047630.1.1	Tomato	endoplasmic reticulum, extracellular, plastid	80.88	80.49
PGSC0003DMT400074637	Potato	cytosol	80.64	80.24
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	80.15	79.18
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	79.66	78.69
KRH49832	Soybean	cytosol	78.43	78.43
TraesCS5A01G284600.1	Wheat	golgi	78.92	78.35
Zm00001d021506_P001	Maize	extracellular, plasma membrane	79.41	78.26
TraesCS5D01G292000.1	Wheat	cytosol	78.68	78.1
TraesCS5B01G283800.2	Wheat	cytosol	78.19	77.62
GSMUA_Achr5P19870_001	Banana	cytosol	78.19	74.88
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	77.45	74.53
HORVU5Hr1G076080.1	Barley	mitochondrion	78.68	66.88
Bra034353.1-P	Field mustard	cytosol	20.83	28.62
Bra006138.1-P	Field mustard	plastid	18.14	20.33
Bra012018.1-P	Field mustard	cytosol	3.68	19.23
Bra008919.1-P	Field mustard	plastid	19.36	18.37
Bra037878.1-P	Field mustard	plastid	13.97	17.48

Protein Annotations

Gene3D:3.60.110.10	MapMan:6.2.4.5	EnsemblPlantsGene:Bra024290	EnsemblPlants:Bra024290.1	EnsemblPlants:Bra024290.1-P	InterPro:C-N_Hydrolase
InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010	InterPro:IPR036526	UniProt:M4E686	PFAM:PF00795
PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF2	SUPFAM:SSF56317	UniParc:UPI000253F3AD	SEG:seg

Description

AT5G64370 (E=5e-222) BETA-UP | BETA-UP (beta-ureidopropionase); beta-ureidopropionase

Coordinates

chrA06:+:14756671..14758317

Molecular Weight (calculated)

45470.1 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.323

Length

408 amino acids

Sequence
(BLAST)

001: MDKSISENGE TTADGSIRGY DSLHQLLSAN LKPELYQEVS RLLLGSNCGR SLEQIVLPDS AKALSSKHDF DLQAVSFSAD KEQMRKPRVV RVGLIQNSIA
101: LPTTAPFSDQ KRGIFEKLKP MIDAAGAAGV NILCLQEAWT MPFAFCTREK KWCEFAEPVN GESTKFLQEL AKKYNMVIVS PILERDMDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPVEARN AAIANSYFVG
301: SINRVGTEVF PNAFTSGDGK PQHNDFGHFY GSSYFSAPDA SCTPSLSRCR DGLMISDMDL NLCRQYKDKW GFRMTARYEV YADLLGEYIK PDFKPRVVSD
401: PMLHKNSS

Best Arabidopsis Sequence Match ( AT5G64370.1 )
(BLAST)

001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST

Arabidopsis Description

PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.