Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58268 | Canola | nucleus | 92.89 | 92.89 |
| Bra024290.1-P | Field mustard | cytosol | 92.89 | 92.89 |
| CDX84520 | Canola | cytosol | 92.4 | 92.4 |
| CDY18713 | Canola | cytosol | 92.4 | 92.4 |
| Bra037776.1-P | Field mustard | cytosol | 92.16 | 92.16 |
| CDX81223 | Canola | cytosol | 91.67 | 91.67 |
| VIT_03s0017g00550.t01 | Wine grape | cytosol | 83.58 | 82.57 |
| Solyc10g047630.1.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 82.6 | 82.2 |
| PGSC0003DMT400074637 | Potato | cytosol | 81.86 | 81.46 |
| KRH49832 | Soybean | cytosol | 79.41 | 79.41 |
| Os07t0485100-01 | Rice | cytoskeleton, cytosol, peroxisome | 80.15 | 79.18 |
| EER99388 | Sorghum | cytoskeleton, cytosol, peroxisome | 79.9 | 78.93 |
| Zm00001d021506_P001 | Maize | extracellular, plasma membrane | 79.9 | 78.74 |
| TraesCS5A01G284600.1 | Wheat | golgi | 79.17 | 78.59 |
| TraesCS5D01G292000.1 | Wheat | cytosol | 78.92 | 78.35 |
| TraesCS5B01G283800.2 | Wheat | cytosol | 78.43 | 77.86 |
| GSMUA_Achr5P19870_001 | Banana | cytosol | 78.43 | 75.12 |
| GSMUA_Achr11P... | Banana | cytoskeleton, cytosol, peroxisome | 76.23 | 73.35 |
| HORVU5Hr1G076080.1 | Barley | mitochondrion | 78.92 | 67.08 |
| AT2G27450.2 | Thale cress | cytosol | 21.08 | 26.38 |
| AT5G12040.1 | Thale cress | plastid | 18.14 | 20.05 |
| AT4G08790.1 | Thale cress | plastid | 13.24 | 17.59 |
Protein Annotations
| Gene3D:3.60.110.10 | MapMan:6.2.4.5 | EntrezGene:836558 | UniProt:A0A178UGH6 | ProteinID:AED97881.1 | EMBL:AF465754 |
| ArrayExpress:AT5G64370 | EnsemblPlantsGene:AT5G64370 | RefSeq:AT5G64370 | TAIR:AT5G64370 | RefSeq:AT5G64370-TAIR-G | EnsemblPlants:AT5G64370.1 |
| TAIR:AT5G64370.1 | Unigene:At.66660 | ProteinID:BAB09868.1 | Symbol:BETA-UP | EMBL:BT000451 | EMBL:BT008503 |
| InterPro:C-N_Hydrolase | InterPro:C-N_Hydrolase_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003837 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006212 |
| GO:GO:0006807 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016787 | GO:GO:0016810 | GO:GO:0019483 |
| GO:GO:0043562 | InterPro:IPR003010 | InterPro:IPR036526 | RefSeq:NP_201242.2 | ProteinID:OAO92730.1 | PFAM:PF00795 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50263 | PANTHER:PTHR43674 | PANTHER:PTHR43674:SF2 | UniProt:Q8H183 | SUPFAM:SSF56317 |
| UniParc:UPI0000003378 | SEG:seg | : | : | : | : |
Description
PYD3Beta-ureidopropionase [Source:UniProtKB/Swiss-Prot;Acc:Q8H183]
Coordinates
chr5:+:25739131..25741222
Molecular Weight (calculated)
45555.1 Da
IEP (calculated)
6.321
GRAVY (calculated)
-0.298
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHMISENGE TSAEGSICGY DSLHQLLSAN LKPELYQEVN RLLLGRNCGR SLEQIVLPES AKALSSKHDF DLQAASFSAD KEQMRNPRVV RVGLIQNSIA
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST
101: LPTTAPFSDQ TRGIFDKLKP IIDAAGVAGV NILCLQEAWT MPFAFCTRER RWCEFAEPVD GESTKFLQEL AKKYNMVIVS PILERDIDHG EVLWNTAVII
201: GNNGNIIGKH RKNHIPRVGD FNESTYYMEG DTGHPVFETV FGKIAVNICY GRHHPLNWLA FGLNGAEIVF NPSATVGELS EPMWPIEARN AAIANSYFVG
301: SINRVGTEVF PNPFTSGDGK PQHNDFGHFY GSSHFSAPDA SCTPSLSRYK DGLLISDMDL NLCRQYKDKW GFRMTARYEV YADLLAKYIK PDFKPQVVSD
401: PLLHKNST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.