CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30547	Canola	cytosol	98.33	98.99
AT2G27450.2	Thale cress	cytosol	95.99	88.04
VIT_06s0080g00560.t01	Wine grape	cytosol	85.95	86.53
KRH42198	Soybean	cytosol	85.62	85.62
GSMUA_Achr6P19390_001	Banana	cytosol	79.26	84.95
PGSC0003DMT400067716	Potato	cytosol	84.95	84.67
KRH26651	Soybean	cytosol	84.62	84.62
KRH22668	Soybean	cytosol	84.62	84.62
Solyc11g068540.1.1	Tomato	endoplasmic reticulum, extracellular	84.62	84.33
TraesCS5A01G024500.1	Wheat	cytosol	79.26	79.0
HORVU5Hr1G006730.1	Barley	cytosol, mitochondrion	79.26	78.74
TraesCS5B01G022300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.93	78.41
TraesCS5D01G031200.1	Wheat	golgi	78.93	78.41
EES05187	Sorghum	cytosol	77.93	78.19
Os02t0533900-01	Rice	plasma membrane	78.6	78.07
Zm00001d016704_P001	Maize	extracellular	76.59	76.33
CDX71452	Canola	plastid	35.79	48.42
CDX91177	Canola	cytosol, extracellular, nucleus	12.04	29.27
CDX78463	Canola	plastid	25.42	20.88
CDY58268	Canola	nucleus	28.43	20.83
CDX70441	Canola	plastid	25.42	20.71
CDY18713	Canola	cytosol	28.09	20.59
CDX81223	Canola	cytosol	28.09	20.59
CDX97163	Canola	plastid	26.09	20.37
CDX84520	Canola	cytosol	27.76	20.34
CDY70138	Canola	plastid	20.07	20.13
CDX75139	Canola	plastid	20.07	20.13
CDX91178	Canola	plastid	11.37	19.77
CDX69711	Canola	plastid	25.08	17.44

Protein Annotations

KEGG:00330+3.5.1.53	Gene3D:3.60.110.10	MapMan:8.1.1.3	GO:A0A078CK68	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDX77117	ProteinID:CDX77117	ProteinID:CDX77117.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006596
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0050126	EnsemblPlantsGene:GSBRNA2T00127717001	InterPro:IPR003010	InterPro:IPR036526	InterPro:N-carbamoylputrescine_amidase	PFAM:PF00795
PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF7	MetaCyc:PWY-43	SUPFAM:SSF56317	TIGRFAMs:TIGR03381
UniPathway:UPA00534	UniParc:UPI0004EB369F	:	:	:	:

Description

BnaC04g39120D

Coordinates

chrLK031809:-:1231378..1233425

Molecular Weight (calculated)

33593.8 Da

IEP (calculated)

5.669

GRAVY (calculated)

-0.333

Length

299 amino acids

Sequence
(BLAST)

001: MEMEGRRREV VVSSLQFACS DDISSNVASA ERLVREAHAK GANIVLIQEL FEGYYFCQAQ REDYFQRAKP YKDHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEVLF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGN SFIAGPTGEI VAEADDKTEA VLVAQFDLEK IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

Best Arabidopsis Sequence Match ( AT2G27450.1 )
(BLAST)

001: METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

Arabidopsis Description

CPAN-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.