CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42198	Soybean	cytosol	96.32	96.32
KRH26651	Soybean	cytosol	95.99	95.99
VIT_06s0080g00560.t01	Wine grape	cytosol	85.95	86.53
PGSC0003DMT400067716	Potato	cytosol	86.29	86.0
Solyc11g068540.1.1	Tomato	endoplasmic reticulum, extracellular	85.95	85.67
CDX77117	Canola	cytosol	84.62	84.62
GSMUA_Achr6P19390_001	Banana	cytosol	78.6	84.23
CDY30547	Canola	cytosol	83.61	84.18
Bra034353.1-P	Field mustard	cytosol	83.61	84.18
EES05187	Sorghum	cytosol	78.93	79.19
TraesCS5D01G031200.1	Wheat	golgi	79.6	79.07
TraesCS5A01G024500.1	Wheat	cytosol	79.26	79.0
HORVU5Hr1G006730.1	Barley	cytosol, mitochondrion	79.26	78.74
TraesCS5B01G022300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.93	78.41
AT2G27450.2	Thale cress	cytosol	85.28	78.22
Os02t0533900-01	Rice	plasma membrane	78.6	78.07
Zm00001d016704_P001	Maize	extracellular	77.26	77.0
Bra012018.1-P	Field mustard	cytosol	17.39	66.67
CDX71452	Canola	plastid	31.44	42.53
KRG93006	Soybean	cytosol	20.07	20.91
KRH52237	Soybean	nucleus	24.41	20.74
KRH49832	Soybean	cytosol	27.76	20.34
KRH36253	Soybean	nucleus	21.74	20.31
KRG89323	Soybean	plastid	14.38	18.61

Protein Annotations

KEGG:00330+3.5.1.53	EntrezGene:100785492	Gene3D:3.60.110.10	MapMan:8.1.1.3	EMBL:ACUP02008425	InterPro:C-N_Hydrolase
InterPro:C-N_Hydrolase_sf	EnsemblPlantsGene:GLYMA_13G315800	GO:GO:0003674	GO:GO:0003824	GO:GO:0006596	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0016810
GO:GO:0050126	UniProt:I1M4B9	InterPro:IPR003010	InterPro:IPR036526	EnsemblPlants:KRH22668	ProteinID:KRH22668
ProteinID:KRH22668.1	InterPro:N-carbamoylputrescine_amidase	PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF7
MetaCyc:PWY-43	SUPFAM:SSF56317	TIGRFAMs:TIGR03381	UniParc:UPI000233C0A0	:	:

Description

hypothetical protein

Coordinates

chr13:+:41066946..41070778

Molecular Weight (calculated)

33463.7 Da

IEP (calculated)

5.999

GRAVY (calculated)

-0.272

Length

299 amino acids

Sequence
(BLAST)

001: MEKGRTVVVS ALQFACTDDV STNVATAERL VRAAHKQGAN IILIQELFEG YYFCQAQREE FIQRAKPHKD HPTILRMQKL AKELGVVIPV SFFEEANNAH
101: YNSTAIIDAD GTDLGIYRKS HIPDGPGYEE KFYFNPGDTG FKVFQTKFAK VGVAICWDQW FPEAARAMVL QGAEILFYPT AIGSEPHDGS IDSRDHWKRV
201: MQGHAGANLV PLVASNRIGK EIIETEHGKS EITFYGNSFI AGPTGEIVSI ADDKEEAVLI AQFDLDNIKS MRHCWGVFRD RRPDLYKVLL TLDGNNPVQ

Best Arabidopsis Sequence Match ( AT2G27450.1 )
(BLAST)

001: METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

Arabidopsis Description

CPAN-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.