Factsheet for GSMUA_Achr6P19390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0080g00560.t01	Wine grape	cytosol	86.38	81.14
EES05187	Sorghum	cytosol	84.95	79.53
Bra034353.1-P	Field mustard	cytosol	84.59	79.46
CDY30547	Canola	cytosol	84.59	79.46
TraesCS5A01G024500.1	Wheat	cytosol	85.3	79.33
PGSC0003DMT400067716	Potato	cytosol	85.3	79.33
CDX77117	Canola	cytosol	84.95	79.26
KRH42198	Soybean	cytosol	84.95	79.26
Os02t0533900-01	Rice	plasma membrane	85.3	79.07
HORVU5Hr1G006730.1	Barley	cytosol, mitochondrion	85.3	79.07
Solyc11g068540.1.1	Tomato	endoplasmic reticulum, extracellular	84.95	79.0
TraesCS5D01G031200.1	Wheat	golgi	84.95	78.74
TraesCS5B01G022300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.95	78.74
KRH22668	Soybean	cytosol	84.23	78.6
KRH26651	Soybean	cytosol	84.23	78.6
Zm00001d016704_P001	Maize	extracellular	83.15	77.33
AT2G27450.2	Thale cress	cytosol	84.59	72.39
Bra012018.1-P	Field mustard	cytosol	17.2	61.54
CDX71452	Canola	plastid	30.11	38.01
GSMUA_Achr1P21960_001	Banana	cytosol	24.37	22.15
GSMUA_Achr2P19050_001	Banana	cytosol	21.86	21.55
GSMUA_Achr1P12420_001	Banana	mitochondrion	24.01	18.72
GSMUA_Achr5P19870_001	Banana	cytosol	27.6	18.08
GSMUA_Achr11P...	Banana	cytoskeleton, cytosol, peroxisome	27.24	17.92

Protein Annotations

KEGG:00330+3.5.1.53	Gene3D:3.60.110.10	MapMan:8.1.1.3	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0006596	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016787	GO:GO:0016810	GO:GO:0050126	EnsemblPlantsGene:GSMUA_Achr6G19390_001	EnsemblPlants:GSMUA_Achr6P19390_001
EnsemblPlants:GSMUA_Achr6T19390_001	InterPro:IPR003010	InterPro:IPR036526	UniProt:M0T8D7	InterPro:N-carbamoylputrescine_amidase	PFAM:PF00795
PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF3	SUPFAM:SSF56317	TIGRFAMs:TIGR03381	UniParc:UPI000296E2D7

Description

N-carbamoylputrescine amidase [Source:GMGC_GENE;Acc:GSMUA_Achr6G19390_001]

Coordinates

chr6:+:13686232..13689700

Molecular Weight (calculated)

31176.1 Da

IEP (calculated)

5.208

GRAVY (calculated)

-0.171

Length

279 amino acids

Sequence
(BLAST)

001: MVVVAALQFA CSDSVSENVD TAERLVRAAH KKGANIVLIQ ELFEGYYFCQ AQRADFFQHA KPYKEHPTIL RMQKLAKELG VVIPVSFFEE ANNAHYNSVA
101: IIDADGTDLG YQEKFYFNPG DTGFKVFTTK FAKIGVAICW DQWFPEAARA MALQGAEILF YPTAIGSEPQ DEGLDSREHW KRVMQGHAGA NLVPLVASNR
201: IGKEMIETEH GNSTITFYGN SFIAGPTGEL VALANDKDEE ILVAEFDLDK IKAQRLSWGI FRDRRPDLYK VLLTLDGAK

Best Arabidopsis Sequence Match ( AT2G27450.1 )
(BLAST)

001: METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

Arabidopsis Description

CPAN-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.