Factsheet for Os02t0533900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 18260611
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05187	Sorghum	cytosol	92.36	93.29
Zm00001d016704_P001	Maize	extracellular	91.69	92.0
TraesCS5A01G024500.1	Wheat	cytosol	90.37	90.67
TraesCS5D01G031200.1	Wheat	golgi	90.03	90.03
TraesCS5B01G022300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.03	90.03
HORVU5Hr1G006730.1	Barley	cytosol, mitochondrion	90.03	90.03
GSMUA_Achr6P19390_001	Banana	cytosol	79.07	85.3
VIT_06s0080g00560.t01	Wine grape	cytosol	78.74	79.8
KRH42198	Soybean	cytosol	79.07	79.6
PGSC0003DMT400067716	Potato	cytosol	79.07	79.33
KRH26651	Soybean	cytosol	78.74	79.26
CDY30547	Canola	cytosol	78.07	79.12
Bra034353.1-P	Field mustard	cytosol	78.07	79.12
Solyc11g068540.1.1	Tomato	endoplasmic reticulum, extracellular	78.74	79.0
KRH22668	Soybean	cytosol	78.07	78.6
CDX77117	Canola	cytosol	78.07	78.6
AT2G27450.2	Thale cress	cytosol	77.74	71.78
Bra012018.1-P	Field mustard	cytosol	16.28	62.82
CDX71452	Canola	plastid	28.57	38.91
Os03t0175600-01	Rice	mitochondrion	25.91	25.16
Os12t0502500-01	Rice	plastid	22.59	21.05
Os07t0485100-01	Rice	cytoskeleton, cytosol, peroxisome	28.24	20.58
Os06t0206000-00	Rice	cytosol, mitochondrion, plastid	20.27	18.77

Protein Annotations

KEGG:00330+3.5.1.53	Gene3D:3.60.110.10	EntrezGene:4329560	MapMan:8.1.1.3	EMBL:AB062681	EMBL:AK061722
EMBL:AK106147	ProteinID:BAD28433.1	ProteinID:BAD29288.1	ProteinID:BAF08947.1	ProteinID:BAS79051.1	InterPro:C-N_Hydrolase
InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0006596	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0033388	GO:GO:0050126
InterPro:IPR003010	InterPro:IPR036526	InterPro:N-carbamoylputrescine_amidase	EnsemblPlantsGene:Os02g0533900	EnsemblPlants:Os02t0533900-01	PFAM:PF00795
PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF3	UniProt:Q93XI4	SUPFAM:SSF56317	TIGRFAMs:TIGR03381
UniParc:UPI000009E47C	RefSeq:XP_015625266.1	SEG:seg	:	:	:

Description

CARBAMOYLPUTRESCINE AMIDASE 1Similar to Carbon-nitrogen hydrolase family protein. (Os02t0533900-01);Similar to Carbon-nitrogen hydrolase family protein. (Os02t0533900-02)

Coordinates

chr2:+:19649913..19653378

Molecular Weight (calculated)

33464.4 Da

IEP (calculated)

5.109

GRAVY (calculated)

-0.339

Length

301 amino acids

Sequence
(BLAST)

001: MAGGGGAGSK VSVAAVQFAC TDVESENVDT AERLIREAHK KGANIVLVQE LFEGQYFCQA QRLDFFQRAK PYKGNPTIIR FQKLAKELEV VIPVSFFEEA
101: NNAHYNSVAI IDADGTDLGL YRKSHIPDGP GYQEKFYFNP GDTGFKAFKT KYATIGVGIC WDQWFPECAR AMVLQGAEIL FYPTAIGSEP QDNNLDSREH
201: WKRVMQGHAG ANLVPLVASN RIGRETVETE HGESTITFFG NSFIAGPTGE IVKLANDKDE DVLVAEFDLD EIKSTRHGWG IFRDRRPDLY KVLLTLDGEK
301: S

Best Arabidopsis Sequence Match ( AT2G27450.1 )
(BLAST)

001: METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

Arabidopsis Description

CPAN-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.