Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0175600-01 | Rice | mitochondrion | 79.89 | 90.97 |
| TraesCS4A01G012200.1 | Wheat | golgi, unclear | 85.27 | 86.49 |
| HORVU4Hr1G076100.13 | Barley | plastid | 84.7 | 86.42 |
| TraesCS4B01G292100.1 | Wheat | plastid | 84.99 | 86.21 |
| TraesCS4D01G290800.1 | Wheat | plastid | 84.42 | 85.88 |
| GSMUA_Achr1P21960_001 | Banana | cytosol | 73.94 | 85.02 |
| CDX91177 | Canola | cytosol, extracellular, nucleus | 28.33 | 81.3 |
| Zm00001d027876_P004 | Maize | plastid | 89.24 | 72.41 |
| VIT_04s0008g01690.t01 | Wine grape | plastid | 72.52 | 70.33 |
| KRH52237 | Soybean | nucleus | 69.69 | 69.89 |
| CDX91178 | Canola | plastid | 33.99 | 69.77 |
| Bra006138.1-P | Field mustard | plastid | 71.1 | 68.96 |
| CDX78463 | Canola | plastid | 71.1 | 68.96 |
| GSMUA_Achr1P12420_001 | Banana | mitochondrion | 69.69 | 68.72 |
| CDX70441 | Canola | plastid | 70.82 | 68.12 |
| AT5G12040.1 | Thale cress | plastid | 70.82 | 67.75 |
| Solyc07g041280.2.1 | Tomato | plastid | 69.12 | 67.4 |
| Solyc08g062190.2.1 | Tomato | plastid | 70.82 | 67.39 |
| Zm00001d048292_P003 | Maize | plastid | 81.02 | 67.14 |
| CDX97163 | Canola | plastid | 67.99 | 62.66 |
| PGSC0003DMT400050357 | Potato | cytosol | 61.47 | 61.13 |
| KRG89323 | Soybean | plastid | 38.24 | 58.44 |
| KXG19560 | Sorghum | cytosol | 49.29 | 57.24 |
| Bra008919.1-P | Field mustard | plastid | 66.57 | 54.65 |
| CDX69711 | Canola | plastid | 66.29 | 54.42 |
| EES16018 | Sorghum | plastid | 26.63 | 28.57 |
| EES05187 | Sorghum | cytosol | 22.1 | 26.17 |
| EER99388 | Sorghum | cytoskeleton, cytosol, peroxisome | 22.66 | 19.37 |
Protein Annotations
| Gene3D:3.60.110.10 | MapMan:4.1.2.1.4 | UniProt:A0A1B6QQ64 | InterPro:C-N_Hydrolase | InterPro:C-N_Hydrolase_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006107 | GO:GO:0006108 | GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016787 | GO:GO:0016810 | GO:GO:0050152 | InterPro:IPR003010 | InterPro:IPR036526 |
| EnsemblPlants:KXG40066 | ProteinID:KXG40066 | ProteinID:KXG40066.1 | PFAM:PF00795 | PFscan:PS50263 | PANTHER:PTHR23088 |
| PANTHER:PTHR23088:SF30 | EnsemblPlantsGene:SORBI_3001G485800 | SUPFAM:SSF56317 | UniParc:UPI00081AE9FA | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:75652998..75656585
Molecular Weight (calculated)
37944.4 Da
IEP (calculated)
7.763
GRAVY (calculated)
-0.092
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAAAAAAAT STAAALLAPG LKLCAGRARV SSCRLPLRRV AAMASAPNSS FRPEEARSPP ALELPTPPLS KFKVALCQLS VTADKSRNIA HARAAIEKAA
101: SDGAKLVLLP EIWNGPYSND SFPEYAEDIE AGGDAAPSFS MMSEVARSLQ ITLVGGSIAE RSGNNLYNTC CVFGSDGQLK GKHRKIHLFD IDIPGKITFK
201: ESKTLTAGQS PTVVDTDVGR IGIGICYDIR FQELAMLYAA RGAHLLCYPG AFNMTTGPLH WELLQRARAA DNQLFVATCG PARDTSAGYV AWGHSTLVGP
301: FGEVIATTEH EETTIIADID YSLIEQRRQF LPLQHQRRGD LYQLVDVQRL GSN
101: SDGAKLVLLP EIWNGPYSND SFPEYAEDIE AGGDAAPSFS MMSEVARSLQ ITLVGGSIAE RSGNNLYNTC CVFGSDGQLK GKHRKIHLFD IDIPGKITFK
201: ESKTLTAGQS PTVVDTDVGR IGIGICYDIR FQELAMLYAA RGAHLLCYPG AFNMTTGPLH WELLQRARAA DNQLFVATCG PARDTSAGYV AWGHSTLVGP
301: FGEVIATTEH EETTIIADID YSLIEQRRQF LPLQHQRRGD LYQLVDVQRL GSN
001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
Arabidopsis Description
NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.