Factsheet for Os09t0560600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97184	Sorghum	plasma membrane	72.08	70.47
TraesCS5D01G390300.2	Wheat	plasma membrane, plastid	66.67	65.0
Zm00001d021371_P001	Maize	plasma membrane	70.66	64.42
TraesCS5A01G380500.1	Wheat	plasma membrane	65.53	64.07
TraesCS5B01G384100.1	Wheat	plasma membrane	64.1	60.81
Os02t0173800-01	Rice	plasma membrane	60.4	60.57
HORVU5Hr1G094000.6	Barley	plasma membrane, plastid	65.24	60.26
Os06t0665000-01	Rice	plasma membrane	60.11	58.94
Os03t0120100-01	Rice	plasma membrane	53.85	55.59
Os05t0529900-00	Rice	plasma membrane	52.42	53.49
Os03t0785500-01	Rice	plasma membrane	50.14	50.14
Os09t0560700-01	Rice	cytosol, peroxisome, plastid	2.56	2.78

Protein Annotations

MapMan:24.1.2.4.1.2	EntrezGene:4347852	MapMan:5.8.2.1.1.2	EMBL:AK070937	ProteinID:BAD45964.1	ProteinID:BAD46079.1
ProteinID:BAF25842.1	ProteinID:BAT09400.1	InterPro:CDC50/LEM3_fam	ProteinID:EEE70219.1	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:Os09g0560600	EnsemblPlants:Os09t0560600-01	PFAM:PF03381	PIRSF:PIRSF015840	PANTHER:PTHR10926
PANTHER:PTHR10926:SF27	UniProt:Q653D8	TMHMM:TMhelix	UniParc:UPI000043A46D	RefSeq:XP_015611958.1	RefSeq:XP_015611959.1
RefSeq:XP_015611960.1	RefSeq:XP_015611961.1	SEG:seg	:	:	:

Description

Protein of unknown function DUF284, transmembrane eukaryotic family protein. (Os09t0560600-01)

Coordinates

chr9:+:22275274..22277863

Molecular Weight (calculated)

39683.3 Da

IEP (calculated)

10.258

GRAVY (calculated)

-0.246

Length

351 amino acids

Sequence
(BLAST)

001: MPPVNSDGAG PSSGEDGSAA AVKKRNRPKY HRFTQQELQA CKPILIPQTV ILVLVFVGLI FIPIGLACIA ASNKVVELVD RYDTKCVPRN MLRNKVAFIQ
101: NSSIDKTCTR VFKVPKDMKK PIYIYYQLDK FYQNHRRYVK SLNDMQLRNP KKVADTQYCS PEATANGRPI VPCGLIAWSL FNDTYSFTRG HGNETLRVNK
201: DGISWKSERN RRFGKNVYPK NFQNGTLIGG GQLNPSKPLS EQEDLIVWMR IAALPTFRKL YGRIDMDLQA GDRVEVTMQN NYNSYSFNGK KSLVLSTAGW
301: LGGKNAFLGR AYAIVGLACF LLALLLALLY FVFPMREEHL SLHYTPARLV R

Best Arabidopsis Sequence Match ( AT1G16360.1 )
(BLAST)

001: MSTKKHNLLA NFASSDSRFT QQELPACKPI LTPKWVILTF LVSGVVFIPL GVICLFASQG VIEIVDRYDT DCIPLSSRDN KVRYIQGLED KRCNRTITVT
101: KTMKNPVYVY YQLENYYQNH RRYVKSRQDG QLRSPKDEHE TKSCAPEDTL GGQPIVPCGL VAWSLFNDTY DFTRNNQKLP VNKKDISWKS DRESKFGKNV
201: FPKNFQKGSL IGGKSLDQDI PLSEQEDLIV WMRTAALPTF RKLYGKIDTD LQAGDTIKVL LQNNYNTYSF NGKKKLVLST TSWLGGRNDF LGIAYLTVGS
301: ICLFLAVSFS VLYLAKPRQL GDPSYLSWNR SAGGGR

Arabidopsis Description

LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Source:TAIR;Acc:AT1G16360]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.