Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19858 | Sorghum | plasma membrane | 77.03 | 77.49 |
| TraesCS1B01G364300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 75.58 | 76.47 |
| TraesCS1D01G352700.1 | Wheat | plasma membrane | 75.29 | 76.18 |
| Zm00001d038750_P006 | Maize | plasma membrane | 75.0 | 76.11 |
| TraesCS1A01G350000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 75.29 | 74.21 |
| Os03t0120100-01 | Rice | plasma membrane | 70.64 | 71.47 |
| VIT_00s2279g00010.t01 | Wine grape | cytosol | 44.48 | 64.02 |
| VIT_00s1667g00010.t01 | Wine grape | plasma membrane | 56.69 | 63.31 |
| GSMUA_Achr4P29460_001 | Banana | plasma membrane | 63.66 | 62.93 |
| GSMUA_Achr2P11380_001 | Banana | plasma membrane | 62.5 | 62.32 |
| KRG94866 | Soybean | plasma membrane | 58.72 | 57.88 |
| PGSC0003DMT400055262 | Potato | plasma membrane | 56.69 | 56.69 |
| Solyc02g036440.2.1 | Tomato | plasma membrane | 56.4 | 56.4 |
| Os02t0173800-01 | Rice | plasma membrane | 56.98 | 56.0 |
| KRH09908 | Soybean | plasma membrane | 55.81 | 55.81 |
| Os06t0665000-01 | Rice | plasma membrane | 54.94 | 52.79 |
| Os09t0560600-01 | Rice | plasma membrane | 53.49 | 52.42 |
| HORVU1Hr1G081400.10 | Barley | cytosol, endoplasmic reticulum | 52.33 | 51.87 |
| Os03t0785500-01 | Rice | plasma membrane | 51.16 | 50.14 |
| KRH06673 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 49.71 | 48.31 |
| KRH23423 | Soybean | plasma membrane | 51.74 | 46.72 |
| VIT_16s0115g00160.t01 | Wine grape | cytosol | 26.45 | 42.92 |
| HORVU6Hr1G093390.1 | Barley | cytosol, endoplasmic reticulum | 44.19 | 41.53 |
| Os09t0560700-01 | Rice | cytosol, peroxisome, plastid | 1.16 | 1.23 |
Protein Annotations
| EnsemblPlants:Os05t0529900-00 | EnsemblPlantsGene:Os05g0529900 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:CDC50/LEM3_fam |
| PANTHER:PTHR10926 | PANTHER:PTHR10926:SF28 | PFAM:PF03381 | PIRSF:PIRSF015840 | ProteinID:BAS95022.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00039395A8 | UniProt:A0A0P0WPU4 | MapMan:5.8.2.1.1.2 | MapMan:24.1.2.4.1.2 | : |
Description
Similar to Cell division control protein 50. (Os05t0529900-00)
Coordinates
chr5:-:26322736..26325818
Molecular Weight (calculated)
38327.0 Da
IEP (calculated)
7.053
GRAVY (calculated)
-0.028
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLEIDESFS SGFFLCFFFL SPADSKFTQQ ELPAWKPLYT PGIVIGAFSL IGIIFIPIGL VSIAASQEVV ELVDKYDGEC VTANDKVGFI QDTKTDKACT
101: RTITVPKPMK GPIQVYYQLE NFYQNHRRYV KSRSDKQLRS KEFSSVIKTC DPEAISEGGA PIVPCGLIAW SLFNDTFTFS VNKKTVQVNK KNIAWSSDRT
201: IKFGSDVFPE NFQKGGLIGG GQLNEKLPLS EQEDLIVWMR TAALPTFRKL YGRIETDIMA SDEITVVIQN NYNTYSFGGT KALVLSTTSW IGGKNNFIGF
301: AYVAIGTISF LIALAFVGLN MVKPRTLGDP SYLSWNKENP DYVQ
101: RTITVPKPMK GPIQVYYQLE NFYQNHRRYV KSRSDKQLRS KEFSSVIKTC DPEAISEGGA PIVPCGLIAW SLFNDTFTFS VNKKTVQVNK KNIAWSSDRT
201: IKFGSDVFPE NFQKGGLIGG GQLNEKLPLS EQEDLIVWMR TAALPTFRKL YGRIETDIMA SDEITVVIQN NYNTYSFGGT KALVLSTTSW IGGKNNFIGF
301: AYVAIGTISF LIALAFVGLN MVKPRTLGDP SYLSWNKENP DYVQ
001: MSSTAASSTV GGGGSSEISG VKKTSKRPKY SRFTQQELPA CKPILTPRWV ILTFLVAGVV FIPLGVICLF ASQGVVEIVD RYDTDCIPTS SRNNMVAYIQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ
Arabidopsis Description
ALIS5ALA-interacting subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.