Factsheet for Solyc02g036440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
plasma membrane 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055262	Potato	plasma membrane	96.8	96.8
VIT_00s1667g00010.t01	Wine grape	plasma membrane	61.05	68.18
VIT_00s2279g00010.t01	Wine grape	cytosol	45.93	66.11
GSMUA_Achr2P11380_001	Banana	plasma membrane	63.66	63.48
GSMUA_Achr4P29460_001	Banana	plasma membrane	63.37	62.64
HORVU4Hr1G085300.1	Barley	golgi	23.26	62.5
Solyc05g054800.1.1	Tomato	nucleus	63.37	62.29
KRH09908	Soybean	plasma membrane	61.05	61.05
Os03t0120100-01	Rice	plasma membrane	59.88	60.59
KRG94866	Soybean	plasma membrane	60.76	59.89
TraesCS1D01G352700.1	Wheat	plasma membrane	59.01	59.71
TraesCS1B01G364300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	58.43	59.12
Zm00001d038750_P006	Maize	plasma membrane	58.14	59.0
KXG40321	Sorghum	plasma membrane	57.56	58.58
TraesCS4D01G345100.1	Wheat	plasma membrane	56.69	58.56
Zm00001d027401_P001	Maize	plasma membrane	57.85	58.53
EES19858	Sorghum	plasma membrane	58.14	58.48
TraesCS1A01G350000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	58.72	57.88
TraesCS5A01G519200.1	Wheat	plasma membrane	56.1	57.61
TraesCS4B01G350400.1	Wheat	plasma membrane	55.52	57.36
Os05t0529900-00	Rice	plasma membrane	56.4	56.4
HORVU5Hr1G020720.6	Barley	cytosol	36.63	54.55
Solyc08g023460.2.1	Tomato	plasma membrane	52.33	52.63
VIT_16s0115g00160.t01	Wine grape	cytosol	32.27	52.36
KRH23423	Soybean	plasma membrane	56.4	50.92
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	52.33	50.85
HORVU1Hr1G081400.10	Barley	cytosol, endoplasmic reticulum	41.86	41.5
HORVU6Hr1G093390.1	Barley	cytosol, endoplasmic reticulum	34.88	32.79

Protein Annotations

EnsemblPlants:Solyc02g036440.2.1	EnsemblPlantsGene:Solyc02g036440.2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:CDC50/LEM3_fam
PANTHER:PTHR10926	PANTHER:PTHR10926:SF28	PFAM:PF03381	PIRSF:PIRSF015840	TMHMM:TMhelix	UniParc:UPI000276773E
UniProt:K4B5T7	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2	:	:	:

Description

No Description!

Coordinates

chr2:-:30765350..30769255

Molecular Weight (calculated)

38967.1 Da

IEP (calculated)

9.811

GRAVY (calculated)

-0.296

Length

344 amino acids

Sequence
(BLAST)

001: MGEGASSSSK KSRKPDYSRF TQQELPACKP ILTPQWVVTV FIFLGIVFIP IGLASLSASE KVVEIVHRYD EQCVPTNYTQ SDLAYHDRIA FIKNNKSNKT
101: CIVTLTVPKK MKHPIYVYYQ LDNFYQNHRR YVKSRNDEQL RNPNFKGDLK KTCAPEDMNG NEPVIPCGLI AWSLFNDTYG FSIKNKGLPI NRKNISWPSD
201: KKHKFGSKVF PKNFQKGSLI GGGSLNESIP MSEQEDLQVW LRTAALPVFR KLYGKIEHDL EANEIITVVI QNNYNTYTSE GKKSLVLSTT TWIGGKNKFL
301: GIAYLTVGGI CLFVAIIFIL MYVIKPRPFG DPAYLSWNLN PSGN

Best Arabidopsis Sequence Match ( AT1G79450.1 )
(BLAST)

001: MSSTAASSTV GGGGSSEISG VKKTSKRPKY SRFTQQELPA CKPILTPRWV ILTFLVAGVV FIPLGVICLF ASQGVVEIVD RYDTDCIPTS SRNNMVAYIQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ

Arabidopsis Description

ALIS5ALA-interacting subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.