Factsheet for PGSC0003DMT400055262

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
extracellular 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g036440.2.1	Tomato	plasma membrane	96.8	96.8
VIT_00s1667g00010.t01	Wine grape	plasma membrane	60.76	67.86
VIT_00s2279g00010.t01	Wine grape	cytosol	45.93	66.11
HORVU4Hr1G085300.1	Barley	golgi	23.84	64.06
GSMUA_Achr2P11380_001	Banana	plasma membrane	63.95	63.77
GSMUA_Achr4P29460_001	Banana	plasma membrane	63.66	62.93
Os03t0120100-01	Rice	plasma membrane	60.17	60.88
KRH09908	Soybean	plasma membrane	60.47	60.47
TraesCS1D01G352700.1	Wheat	plasma membrane	59.59	60.29
TraesCS1B01G364300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	59.01	59.71
KRG94866	Soybean	plasma membrane	60.17	59.31
Zm00001d038750_P006	Maize	plasma membrane	58.14	59.0
KXG40321	Sorghum	plasma membrane	57.85	58.88
Zm00001d027401_P001	Maize	plasma membrane	58.14	58.82
EES19858	Sorghum	plasma membrane	58.43	58.77
TraesCS1A01G350000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	59.3	58.45
TraesCS4D01G345100.1	Wheat	plasma membrane	56.4	58.26
TraesCS4B01G350400.1	Wheat	plasma membrane	55.52	57.36
TraesCS5A01G519200.1	Wheat	plasma membrane	55.81	57.31
Os05t0529900-00	Rice	plasma membrane	56.69	56.69
HORVU5Hr1G020720.6	Barley	cytosol	37.21	55.41
VIT_16s0115g00160.t01	Wine grape	cytosol	32.27	52.36
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	52.03	50.56
KRH23423	Soybean	plasma membrane	55.81	50.39
HORVU1Hr1G081400.10	Barley	cytosol, endoplasmic reticulum	42.15	41.79
PGSC0003DMT400060190	Potato	plasma membrane	62.21	35.91
HORVU6Hr1G093390.1	Barley	cytosol, endoplasmic reticulum	35.17	33.06

Protein Annotations

EnsemblPlants:PGSC0003DMT400055262	EnsemblPlantsGene:PGSC0003DMG400021458	EntrezGene:102601398	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926	PANTHER:PTHR10926:SF28	PFAM:PF03381	PGSC:PGSC0003DMG400021458	PIRSF:PIRSF015840
RefSeq:XP_006350460.1	TMHMM:TMhelix	UniParc:UPI0002965877	UniProt:M1BXP2	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2

Description

ALA-interacting subunit 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400021458]

Coordinates

chr2:-:17874891..17879429

Molecular Weight (calculated)

39089.2 Da

IEP (calculated)

9.817

GRAVY (calculated)

-0.337

Length

344 amino acids

Sequence
(BLAST)

001: MGEGASSSSK KSRKPDYSRF TQQELPACKP ILTPQWVVTV FIFLGIVFIP IGLASLSASE KVVEIVHRYD EHCAPTNYTQ PDLAYHDRIA FIRNNKSNKT
101: CIRTLTVPKK MKHPIYVYYQ LNNFYQNHRR YVKSRNDEQL RDPNFKGDLK KTCAPEDMNG NEPVIPCGLI AWSLFNDTYG FSIKDKGLPI NRKNISWPSD
201: KKHKFGSKVF PKNFQKGSLI GGGALNESIP MSEQEDLQVW LRTAALPVFR KLYGKIEHDL EANENITVVI QNNYNTYTFE GKKSLVLSTT TWIGGKNKFL
301: GIAYLTVGGI CLFVAIIFIL MYVIKPRPFG DPAYLSWNLN PSGN

Best Arabidopsis Sequence Match ( AT1G79450.1 )
(BLAST)

001: MSSTAASSTV GGGGSSEISG VKKTSKRPKY SRFTQQELPA CKPILTPRWV ILTFLVAGVV FIPLGVICLF ASQGVVEIVD RYDTDCIPTS SRNNMVAYIQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ

Arabidopsis Description

ALIS5ALA-interacting subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.