CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09908	Soybean	plasma membrane	77.95	86.34
VIT_00s2279g00010.t01	Wine grape	cytosol	41.99	66.95
VIT_00s1667g00010.t01	Wine grape	plasma membrane	51.71	63.96
KRG94866	Soybean	plasma membrane	56.17	61.32
HORVU4Hr1G085300.1	Barley	golgi	20.47	60.94
GSMUA_Achr4P29460_001	Banana	plasma membrane	53.54	58.62
GSMUA_Achr2P11380_001	Banana	plasma membrane	52.23	57.68
Zm00001d038750_P006	Maize	plasma membrane	50.92	57.23
EES19858	Sorghum	plasma membrane	51.18	57.02
Solyc02g036440.2.1	Tomato	plasma membrane	50.92	56.4
KRH13042	Soybean	plasma membrane	50.66	56.1
PGSC0003DMT400055262	Potato	plasma membrane	50.39	55.81
Os03t0120100-01	Rice	plasma membrane	49.34	55.29
KRH13775	Soybean	plasma membrane, plastid	49.87	55.23
KRH43674	Soybean	plasma membrane, plastid	49.61	54.94
KRH44838	Soybean	plasma membrane, plastid	49.34	54.65
HORVU5Hr1G020720.6	Barley	cytosol	33.07	54.55
Zm00001d027401_P001	Maize	plasma membrane	48.56	54.41
TraesCS1D01G352700.1	Wheat	plasma membrane	48.29	54.12
TraesCS4D01G345100.1	Wheat	plasma membrane	47.24	54.05
KXG40321	Sorghum	plasma membrane	47.77	53.85
TraesCS1B01G364300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.03	53.82
TraesCS4B01G350400.1	Wheat	plasma membrane	46.72	53.45
TraesCS5A01G519200.1	Wheat	plasma membrane	46.98	53.43
TraesCS1A01G350000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.29	52.72
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	48.82	52.54
KRH37801	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	47.51	52.01
Os05t0529900-00	Rice	plasma membrane	46.72	51.74
KRH12833	Soybean	cytosol	34.38	51.57
VIT_16s0115g00160.t01	Wine grape	cytosol	25.98	46.7
HORVU1Hr1G081400.10	Barley	cytosol, endoplasmic reticulum	33.33	36.6
KRH12834	Soybean	plasma membrane	8.14	31.0
HORVU6Hr1G093390.1	Barley	cytosol, endoplasmic reticulum	28.87	30.05

Protein Annotations

EMBL:ACUP02008465	EnsemblPlants:KRH23423	EnsemblPlantsGene:GLYMA_13G356300	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926	PANTHER:PTHR10926:SF28	PFAM:PF03381	PIRSF:PIRSF015840	ProteinID:KRH23423
ProteinID:KRH23423.1	TMHMM:TMhelix	UniParc:UPI0002969C98	UniProt:K7M3S6	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2

Description

hypothetical protein

Coordinates

chr13:+:44454922..44457325

Molecular Weight (calculated)

43287.3 Da

IEP (calculated)

8.565

GRAVY (calculated)

-0.154

Length

381 amino acids

Sequence
(BLAST)

001: MDMPDDKDAP PTSKKTSTKP IYSKFSQQEL PAWKPILTPG WVISVIGVIF IPIGLASLFS SDCLPPSHAQ NAVAYIQSDT TNKTCITKWT VEHKMEAPIY
101: IYYQLDNYYQ NQMLIFVSRE DRIRYLSLLT IQPTLYLLNR REYSKECVRK CIVSILFFSI IAVIVFKTSN CVDMILVNSC RYGETTNCFP EDKTKDNQPI
201: VPCGLIAWSL FNDTYKFSTN NKDLTVNKKN IAWGSDQRSR FGSDVYPKNF QRGDLIGGAK LNESIPWSQQ EDLIVWMRTA ALPTFRKLYG KIEVDLEVND
301: EIEIAIENNY NTYEFGGKKK LVLSTTTVMG GKNPFLGTAY LFVGGLSLLC AIGFILLYVI KPRPLGDPSY LPWNRNPGSI K

Best Arabidopsis Sequence Match ( AT1G16360.1 )
(BLAST)

001: MSTKKHNLLA NFASSDSRFT QQELPACKPI LTPKWVILTF LVSGVVFIPL GVICLFASQG VIEIVDRYDT DCIPLSSRDN KVRYIQGLED KRCNRTITVT
101: KTMKNPVYVY YQLENYYQNH RRYVKSRQDG QLRSPKDEHE TKSCAPEDTL GGQPIVPCGL VAWSLFNDTY DFTRNNQKLP VNKKDISWKS DRESKFGKNV
201: FPKNFQKGSL IGGKSLDQDI PLSEQEDLIV WMRTAALPTF RKLYGKIDTD LQAGDTIKVL LQNNYNTYSF NGKKKLVLST TSWLGGRNDF LGIAYLTVGS
301: ICLFLAVSFS VLYLAKPRQL GDPSYLSWNR SAGGGR

Arabidopsis Description

LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Source:TAIR;Acc:AT1G16360]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.