CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027401_P001	Maize	plasma membrane	88.46	87.94
Os03t0120100-01	Rice	plasma membrane	82.25	81.76
TraesCS4D01G345100.1	Wheat	plasma membrane	73.37	74.47
TraesCS5A01G519200.1	Wheat	plasma membrane	73.37	74.03
TraesCS4B01G350400.1	Wheat	plasma membrane	72.78	73.87
EES19858	Sorghum	plasma membrane	72.78	71.93
HORVU5Hr1G020720.6	Barley	cytosol	48.82	71.43
HORVU4Hr1G085300.1	Barley	golgi	26.92	71.09
VIT_00s1667g00010.t01	Wine grape	plasma membrane	61.24	67.21
VIT_00s2279g00010.t01	Wine grape	cytosol	47.34	66.95
GSMUA_Achr4P29460_001	Banana	plasma membrane	66.27	64.37
GSMUA_Achr2P11380_001	Banana	plasma membrane	65.09	63.77
EES06351	Sorghum	plastid	60.06	58.17
PGSC0003DMT400055262	Potato	plasma membrane	58.88	57.85
Solyc02g036440.2.1	Tomato	plasma membrane	58.58	57.56
KRH09908	Soybean	plasma membrane	57.99	56.98
EER88783	Sorghum	plasma membrane, plastid	58.88	56.53
KRG94866	Soybean	plasma membrane	57.69	55.87
EER97184	Sorghum	plasma membrane	53.85	50.7
KXG36190	Sorghum	plastid	44.08	49.34
KXG37410	Sorghum	plasma membrane	49.7	48.7
KRH23423	Soybean	plasma membrane	53.85	47.77
VIT_16s0115g00160.t01	Wine grape	cytosol	28.99	46.23
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	47.93	45.76

Protein Annotations

EnsemblPlants:KXG40321	EnsemblPlantsGene:SORBI_3001G528800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:CDC50/LEM3_fam
PANTHER:PTHR10926	PANTHER:PTHR10926:SF26	PFAM:PF03381	PIRSF:PIRSF015840	ProteinID:KXG40321	ProteinID:KXG40321.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0001C80B97	UniProt:A0A1B6QQX1	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2

Description

hypothetical protein

Coordinates

chr1:+:79283642..79286371

Molecular Weight (calculated)

37984.9 Da

IEP (calculated)

8.515

GRAVY (calculated)

-0.124

Length

338 amino acids

Sequence
(BLAST)

001: MDPLEMQHDS KKSNKPKYSK FTQQELPACK PLLTPAIVIS TFLLVGILFV PIGLASLSAS QEIVELVHRY DTSCVPSADK VGFIQDTKTD KSCTRTLTVP
101: KHMKSPIQIY YQIGDFYQNH RRYVKSRSDK QLLYKDAAHL TKDCEPEVYG ADGAPIVPCG LIAWSLFNDT YTISVNKKAI EVNKKDIAWQ SDKNKKFGSD
201: VYPRNFQNGN LIGGAKLNES IPLSEQEDLI VWMRTAALPT FRKLYGRIET DIMENDQLTV VIQNNYNTYS FGGSKALVLS TTSWIGGKNN FIGVAYLSVG
301: GFCLFLALLF LVLYMIKPRY NVLFQSDADA FPIILDLS

Best Arabidopsis Sequence Match ( AT3G12740.1 )
(BLAST)

001: MSSSNTPSSS AAAAGSIDSS AARRNSKRPK YSKFTQQELP ACKPILTPGW VISTFLIISV IFIPLGVISL FASQDVVEIV DRYDSACIPL SDRANKVAYI
101: QGTGNKSCTR TLIVPKRMKQ PIYVYYQLEN FYQNHRRYVK SRSDSQLRSV KDENQIDACK PEDDFGGQPI VPCGLIAWSL FNDTYVLSRN NQGLTVNKKG
201: IAWKSDKEHK FGKNVFPKNF QKGNLTGGAS LDPNKPLSDQ EDLIVWMRTA ALPTFRKLYG KIESDLEKGE NIQVTLQNNY NTYSFSGKKK LVLSTTSWLG
301: GKNDFLGIAY LTVGGICFVL ALAFTVMYLV KPRRLGDPTY LSWNRIPGGR

Arabidopsis Description

ALIS1ALA-interacting subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTW0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.