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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G345100.1 Wheat plasma membrane 98.51 99.1
TraesCS4B01G350400.1 Wheat plasma membrane 97.91 98.5
HORVU4Hr1G085300.1 Barley golgi 32.54 85.16
HORVU5Hr1G020720.6 Barley cytosol 57.61 83.55
Os03t0120100-01 Rice plasma membrane 77.91 76.76
Zm00001d027401_P001 Maize plasma membrane 75.82 74.71
KXG40321 Sorghum plasma membrane 74.03 73.37
TraesCS1A01G350000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 68.06 65.33
GSMUA_Achr4P29460_001 Banana plasma membrane 67.16 64.66
VIT_00s2279g00010.t01 Wine grape cytosol 45.97 64.44
VIT_00s1667g00010.t01 Wine grape plasma membrane 59.1 64.29
GSMUA_Achr2P11380_001 Banana plasma membrane 65.67 63.77
TraesCS6A01G155600.1 Wheat plasma membrane, plastid 62.09 59.77
TraesCS7A01G482200.1 Wheat plasma membrane 60.3 57.55
KRG94866 Soybean plasma membrane 58.51 56.16
Solyc02g036440.2.1 Tomato plasma membrane 57.61 56.1
KRH09908 Soybean plasma membrane 57.61 56.1
PGSC0003DMT400055262 Potato plasma membrane 57.31 55.81
TraesCS5A01G423800.1 Wheat plasma membrane 49.85 48.55
KRH23423 Soybean plasma membrane 53.43 46.98
VIT_16s0115g00160.t01 Wine grape cytosol 28.96 45.75
TraesCS5A01G380500.1 Wheat plasma membrane 48.36 45.13
KRH06673 Soybean endoplasmic reticulum, golgi, plasma membrane 47.16 44.63
Protein Annotations
EnsemblPlants:TraesCS5A01G519200.1EnsemblPlantsGene:TraesCS5A01G519200GO:GO:0005575GO:GO:0016020InterPro:CDC50/LEM3_famPANTHER:PTHR10926
PANTHER:PTHR10926:SF26PFAM:PF03381PIRSF:PIRSF015840TMHMM:TMhelixMapMan:5.8.2.1.1.2MapMan:24.1.2.4.1.2
Description
No Description!
Coordinates
chr5A:+:680832676..680834903
Molecular Weight (calculated)
37557.3 Da
IEP (calculated)
9.713
GRAVY (calculated)
-0.207
Length
335 amino acids
Sequence
(BLAST)
001: MQMYPLEMEG NSNPKTTNKP KYSKFTQQEL PACKPLLTPE IVIAAFALIG ALFVPIGLAS LHASRQVVEL VHRYDASCVP VDDKVGFIQN SRTDKTCTVT
101: MTVPKYMKSP IHVYYLIDGF YQNHRRYVRS RSDKQLRYKS AAHLTSDCVP EGETADHAPI VPCGLVAWSL FNDTYTVRVN GVVTQVNKKD IAWKSDKNNK
201: FGKNIYPSNF QKGRLIGGAT LNESIPLSEQ EDLIVWMRTA ALPTFRKLYG RIEKDINAND NVTVVIQNNY NTYSFGGSKA LVLSTASWIG GKNNFIGMAY
301: LTIGGLCLSL AMGFLVLYMV KRRNFADPSN LSWNR
Best Arabidopsis Sequence Match ( AT1G16360.1 )
(BLAST)
001: MSTKKHNLLA NFASSDSRFT QQELPACKPI LTPKWVILTF LVSGVVFIPL GVICLFASQG VIEIVDRYDT DCIPLSSRDN KVRYIQGLED KRCNRTITVT
101: KTMKNPVYVY YQLENYYQNH RRYVKSRQDG QLRSPKDEHE TKSCAPEDTL GGQPIVPCGL VAWSLFNDTY DFTRNNQKLP VNKKDISWKS DRESKFGKNV
201: FPKNFQKGSL IGGKSLDQDI PLSEQEDLIV WMRTAALPTF RKLYGKIDTD LQAGDTIKVL LQNNYNTYSF NGKKKLVLST TSWLGGRNDF LGIAYLTVGS
301: ICLFLAVSFS VLYLAKPRQL GDPSYLSWNR SAGGGR
Arabidopsis Description
LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Source:TAIR;Acc:AT1G16360]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.