Factsheet for GSMUA_Achr2P11380_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 4
extracellular 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P29460_001	Banana	plasma membrane	91.01	90.23
VIT_00s2279g00010.t01	Wine grape	cytosol	50.14	72.38
VIT_00s1667g00010.t01	Wine grape	plasma membrane	63.77	71.43
HORVU4Hr1G085300.1	Barley	golgi	26.09	70.31
Os03t0120100-01	Rice	plasma membrane	67.54	68.53
Zm00001d038750_P006	Maize	plasma membrane	67.25	68.44
EES19858	Sorghum	plasma membrane	66.96	67.54
GSMUA_Achr6P20180_001	Banana	plastid	68.7	67.52
TraesCS4D01G345100.1	Wheat	plasma membrane	64.06	66.37
Zm00001d027401_P001	Maize	plasma membrane	64.93	65.88
TraesCS4B01G350400.1	Wheat	plasma membrane	63.48	65.77
TraesCS5A01G519200.1	Wheat	plasma membrane	63.77	65.67
TraesCS1D01G352700.1	Wheat	plasma membrane	64.64	65.59
TraesCS1B01G364300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	64.64	65.59
KXG40321	Sorghum	plasma membrane	63.77	65.09
GSMUA_Achr11P...	Banana	plasma membrane, plastid	66.09	64.96
KRH09908	Soybean	plasma membrane	64.06	64.24
TraesCS1A01G350000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	64.93	64.18
PGSC0003DMT400055262	Potato	plasma membrane	63.77	63.95
Solyc02g036440.2.1	Tomato	plasma membrane	63.48	63.66
HORVU5Hr1G020720.6	Barley	cytosol	42.61	63.64
Os05t0529900-00	Rice	plasma membrane	62.32	62.5
KRG94866	Soybean	plasma membrane	60.58	59.89
VIT_16s0115g00160.t01	Wine grape	cytosol	34.78	56.6
GSMUA_Achr7P01140_001	Banana	plasma membrane	55.36	55.2
KRH23423	Soybean	plasma membrane	57.68	52.23
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	51.01	49.72
HORVU1Hr1G081400.10	Barley	cytosol, endoplasmic reticulum	46.09	45.82
HORVU6Hr1G093390.1	Barley	cytosol, endoplasmic reticulum	39.13	36.89

Protein Annotations

EnsemblPlants:GSMUA_Achr2P11380_001	EnsemblPlants:GSMUA_Achr2T11380_001	EnsemblPlantsGene:GSMUA_Achr2G11380_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926	PANTHER:PTHR10926:SF28	PFAM:PF03381	PIRSF:PIRSF015840	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002961D1E	UniProt:M0S729	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2	:

Description

ALA-interacting subunit 5 [Source:GMGC_GENE;Acc:GSMUA_Achr2G11380_001]

Coordinates

chr2:-:14273978..14277551

Molecular Weight (calculated)

38732.4 Da

IEP (calculated)

8.867

GRAVY (calculated)

-0.298

Length

345 amino acids

Sequence
(BLAST)

001: MGDSTSPSDG PAEPRRKSKK PKYSRFTQQE LPACKPLLTP MIVVTTFALI GIIFIPIGLA SLSASEQVVE IVYQYDVDCI PEQSQNDKVA FIQSSVTNKT
101: CTRTLTVPRH MDGPVHIYYE LDNFYQNHRR YVKSRSDKQL RSKASEKVTT NCAPEATTSD GSVIVPCGLI AWSLFNDTYS FAIDSKTIEV NKKNIAWQSD
201: KEHKFGNNVY PKNFQMGGLI GGAKLNASIP LSEQEDLIVW MRTAALPKFR KLYGRIEMDL DANDQITVTI QNNYNTYSFE GKKKLVLSTT SWIGGKNDFL
301: GTAYLTVGSL CLFLAMAFIV LYLLKPRTLG DPSYLSWNRN PDGHY

Best Arabidopsis Sequence Match ( AT1G79450.1 )
(BLAST)

001: MSSTAASSTV GGGGSSEISG VKKTSKRPKY SRFTQQELPA CKPILTPRWV ILTFLVAGVV FIPLGVICLF ASQGVVEIVD RYDTDCIPTS SRNNMVAYIQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ

Arabidopsis Description

ALIS5ALA-interacting subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.