Factsheet for GSMUA_Achr7P01140_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
golgi 1
plasma membrane 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g03980.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	67.92	71.0
KRH37801	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	71.1	70.69
TraesCS5A01G423800.1	Wheat	plasma membrane	69.65	70.06
TraesCS5D01G432300.1	Wheat	plasma membrane	69.36	69.77
TraesCS5B01G426100.1	Wheat	plasma membrane	69.08	69.48
Os03t0785500-01	Rice	plasma membrane	69.94	68.95
KRH12833	Soybean	cytosol	48.55	66.14
KXG37410	Sorghum	plasma membrane	65.61	65.8
Zm00001d034351_P001	Maize	plasma membrane	65.32	65.51
Solyc08g023460.2.1	Tomato	plasma membrane	63.87	64.62
AT5G46150.1	Thale cress	golgi, peroxisome, plasma membrane	63.87	64.43
CDY35146	Canola	plasma membrane	63.01	63.74
Bra017577.1-P	Field mustard	plasma membrane	62.72	63.45
CDY03242	Canola	golgi, peroxisome, plasma membrane, plastid	62.43	63.16
HORVU5Hr1G103360.3	Barley	golgi	67.05	60.73
KRH12834	Soybean	plasma membrane	17.34	60.0
GSMUA_Achr6P20180_001	Banana	plastid	58.67	57.83
GSMUA_Achr11P...	Banana	plasma membrane, plastid	57.51	56.7
GSMUA_Achr2P11380_001	Banana	plasma membrane	55.2	55.36
CDX77634	Canola	golgi	17.92	54.87
GSMUA_Achr4P29460_001	Banana	plasma membrane	54.34	54.02

Protein Annotations

EnsemblPlants:GSMUA_Achr7P01140_001	EnsemblPlants:GSMUA_Achr7T01140_001	EnsemblPlantsGene:GSMUA_Achr7G01140_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926	PANTHER:PTHR10926:SF29	PFAM:PF03381	PIRSF:PIRSF015840	SEG:seg
TMHMM:TMhelix	UniParc:UPI00029614DB	UniProt:M0TDQ4	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2	:

Description

Putative ALA-interacting subunit 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G01140_001]

Coordinates

chr7:+:876897..881216

Molecular Weight (calculated)

39269.1 Da

IEP (calculated)

9.446

GRAVY (calculated)

-0.325

Length

346 amino acids

Sequence
(BLAST)

001: MEAGSTSASG GGTQAHSYSP LRSKAFYKFT QQNLPACKPN LTPARVIAIF LLAGVVFIPV GLVCLRASES VVEILDRYDI ECVPESYRNN KVAYIKDSSI
101: SKNCKRLIKI QKHMKAPIYV YYELDNYYQN HRRYIKSRSD KQLLHGLQYK DTSSCRPEEY NNGLSIVPCG LVAWSLFNDS YTFVRETVEL RINRRNIAWK
201: SDREHKFGRN VYPFNFQNGS LIGGGTLDPD VPLSEQEDLI VWMRTAALPK FRKLYGVIEE DLQADEIIEV HLVNNYNTYS FGGKKKLVLT TKNWLGGKND
301: FLGIAYMATG GLCIFLSILF ALIHVKNPRP HGDPTYSYGN RKSTTS

Best Arabidopsis Sequence Match ( AT5G46150.2 )
(BLAST)

001: MMEVEGSMNR APDQSSFLRS RRSKALYQFK QQKLPACKPV LTPISVITVF MLMGFVFIPI GLITLRASRD AIEIIDRYDV ECIPEEYRTN KLLYITDSSI
101: PKNCTRYLKV QKYMKAPIFI YYQLDNYYQN HRRYVKSRSD QQLLHGLEYS HTSSCEPEES SNGLPIVPCG LIAWSMFNDT FTFSRERTKL NVSRNNIAWK
201: SDREHKFGKN VYPINFQNGT LIGGAKLDPK IPLSDQEDFI VWMRAAALLS FRKLYGRIEE DLEPGKVVEV NLMNNYNTYS FSGQKKLILS TSNWLGGRND
301: FLGITYLVVG SSSIVISIIF MLLHLKNPRP YGDNSWNKKS LSS

Arabidopsis Description

ALIS2Putative ALA-interacting subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q67YS6]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.