Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35146 | Canola | plasma membrane | 91.25 | 91.52 |
| Bra017577.1-P | Field mustard | plasma membrane | 90.96 | 91.23 |
| CDY03242 | Canola | golgi, peroxisome, plasma membrane, plastid | 90.96 | 91.23 |
| CDX77634 | Canola | golgi | 26.82 | 81.42 |
| VIT_10s0003g03980.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 66.18 | 68.58 |
| KRH37801 | Soybean | endoplasmic reticulum, golgi, plasma membrane, plastid | 68.51 | 67.53 |
| KRH12833 | Soybean | cytosol | 47.52 | 64.17 |
| GSMUA_Achr7P01140_001 | Banana | plasma membrane | 64.43 | 63.87 |
| Solyc08g023460.2.1 | Tomato | plasma membrane | 63.27 | 63.45 |
| TraesCS5D01G432300.1 | Wheat | plasma membrane | 59.18 | 59.01 |
| TraesCS5A01G423800.1 | Wheat | plasma membrane | 58.89 | 58.72 |
| TraesCS5B01G426100.1 | Wheat | plasma membrane | 58.31 | 58.14 |
| Zm00001d034351_P001 | Maize | plasma membrane | 56.85 | 56.52 |
| Os03t0785500-01 | Rice | plasma membrane | 57.73 | 56.41 |
| AT3G12740.1 | Thale cress | plastid | 55.98 | 54.86 |
| KXG37410 | Sorghum | plasma membrane | 55.1 | 54.78 |
| AT1G54320.1 | Thale cress | plastid | 55.39 | 54.44 |
| AT1G16360.2 | Thale cress | plastid | 55.1 | 54.0 |
| AT1G79450.1 | Thale cress | plasma membrane | 53.64 | 52.57 |
| HORVU5Hr1G103360.3 | Barley | golgi | 57.73 | 51.83 |
| KRH12834 | Soybean | plasma membrane | 13.99 | 48.0 |
Protein Annotations
| MapMan:24.1.2.4.1.2 | MapMan:5.8.2.1.1.2 | EntrezGene:834657 | UniProt:A0A178UKV9 | ProteinID:AED95345.1 | ProteinID:AED95346.1 |
| EMBL:AK175295 | EMBL:AK176348 | EMBL:AK176392 | EMBL:AK176644 | EMBL:AK221710 | EMBL:AK228602 |
| ArrayExpress:AT5G46150 | EnsemblPlantsGene:AT5G46150 | RefSeq:AT5G46150 | TAIR:AT5G46150 | RefSeq:AT5G46150-TAIR-G | EnsemblPlants:AT5G46150.1 |
| TAIR:AT5G46150.1 | EMBL:AY085923 | ProteinID:BAB08260.1 | EMBL:BT024877 | InterPro:CDC50/LEM3_fam | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_001330145.1 | RefSeq:NP_568657.1 |
| RefSeq:NP_851139.1 | ProteinID:OAO93331.1 | PFAM:PF03381 | PIRSF:PIRSF015840 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10926 | PANTHER:PTHR10926:SF29 |
| UniProt:Q67YS6 | TMHMM:TMhelix | UniParc:UPI000016282F | SEG:seg | : | : |
Description
ALIS2Putative ALA-interacting subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q67YS6]
Coordinates
chr5:-:18707546..18710722
Molecular Weight (calculated)
39547.8 Da
IEP (calculated)
9.662
GRAVY (calculated)
-0.310
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEVEGSMNR APDQSSFLRS RRSKALYQFK QQKLPACKPV LTPISVITVF MLMGFVFIPI GLITLRASRD AIEIIDRYDV ECIPEEYRTN KLLYITDSSI
101: PKNCTRYLKV QKYMKAPIFI YYQLDNYYQN HRRYVKSRSD QQLLHGLEYS HTSSCEPEES SNGLPIVPCG LIAWSMFNDT FTFSRERTKL NVSRNNIAWK
201: SDREHKFGKN VYPINFQNGT LIGGAKLDPK IPLSDQEDFI VWMRAAALLS FRKLYGRIEE DLEPGKVVEV NLMNNYNTYS FSGQKKLILS TSNWLGGRND
301: FLGITYLVVG SSSIVISIIF MLLHLKNPRP YGDNSWNKKS LSS
101: PKNCTRYLKV QKYMKAPIFI YYQLDNYYQN HRRYVKSRSD QQLLHGLEYS HTSSCEPEES SNGLPIVPCG LIAWSMFNDT FTFSRERTKL NVSRNNIAWK
201: SDREHKFGKN VYPINFQNGT LIGGAKLDPK IPLSDQEDFI VWMRAAALLS FRKLYGRIEE DLEPGKVVEV NLMNNYNTYS FSGQKKLILS TSNWLGGRND
301: FLGITYLVVG SSSIVISIIF MLLHLKNPRP YGDNSWNKKS LSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.