CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, plasma membrane

Predictor Summary:

plastid 3
golgi 1
plasma membrane 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12833	Soybean	cytosol	66.38	90.94
KRH12834	Soybean	plasma membrane	23.56	82.0
VIT_10s0003g03980.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	72.13	75.83
GSMUA_Achr7P01140_001	Banana	plasma membrane	70.69	71.1
CDY35146	Canola	plasma membrane	67.53	68.71
AT5G46150.1	Thale cress	golgi, peroxisome, plasma membrane	67.53	68.51
Bra017577.1-P	Field mustard	plasma membrane	67.24	68.42
CDY03242	Canola	golgi, peroxisome, plasma membrane, plastid	67.24	68.42
Solyc08g023460.2.1	Tomato	plasma membrane	66.95	68.13
TraesCS5A01G423800.1	Wheat	plasma membrane	66.67	67.44
TraesCS5D01G432300.1	Wheat	plasma membrane	66.38	67.15
TraesCS5B01G426100.1	Wheat	plasma membrane	66.38	67.15
CDX77634	Canola	golgi	21.26	65.49
Os03t0785500-01	Rice	plasma membrane	64.94	64.39
Zm00001d034351_P001	Maize	plasma membrane	63.51	64.06
KXG37410	Sorghum	plasma membrane	62.64	63.19
HORVU5Hr1G103360.3	Barley	golgi	66.09	60.21
KRH13042	Soybean	plasma membrane	57.47	58.14
KRH44838	Soybean	plasma membrane, plastid	56.61	57.27
KRH13775	Soybean	plasma membrane, plastid	56.61	57.27
KRH43674	Soybean	plasma membrane, plastid	56.03	56.69
KRH09908	Soybean	plasma membrane	55.75	56.4
KRG94866	Soybean	plasma membrane	53.16	53.01
KRH23423	Soybean	plasma membrane	52.01	47.51
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	44.25	43.5

Protein Annotations

EMBL:ACUP02005512	EnsemblPlants:KRH37801	EnsemblPlantsGene:GLYMA_09G090200	EntrezGene:100789806	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926	PANTHER:PTHR10926:SF29	PFAM:PF03381	PIRSF:PIRSF015840
ProteinID:KRH37801	ProteinID:KRH37801.1	ProteinID:KRH37802.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002337FEA
UniProt:K7LCP7	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:12094506..12105176

Molecular Weight (calculated)

39055.0 Da

IEP (calculated)

9.058

GRAVY (calculated)

-0.143

Length

348 amino acids

Sequence
(BLAST)

001: MDLDGGCSST VSTGAQAIPG RSTRHGAFYR FTQQNLPACK PVLTPAAVIA TFLLMGFIFI PVGLVTLRAS NSVVEIVDRY DIDCVPEDFR SNKVAYIKDD
101: SIAKNCSRLL KVLKPMKAPI YIYYQLDNYY QNHRRYVKSR SDLQLLHGLG YNDTSSCKPL ESSHNLPIVP CGLMAWSLFN DTYTFSRGPS ELKVNRKNIA
201: WKSDRDHKFG NHVYPFNFQN GTLIGGGKLD PSIPLGDQED LIVWMRTAAL PTFRKLYGRI EEDLDADDVI VVHLENNYNT YSFGGKKKLV LSTSSWLGGK
301: NDFLGVANLF VGAFCILISI IFLLLHVKNP RPYGDTAYLS WNRKNIAS

Best Arabidopsis Sequence Match ( AT5G46150.2 )
(BLAST)

001: MMEVEGSMNR APDQSSFLRS RRSKALYQFK QQKLPACKPV LTPISVITVF MLMGFVFIPI GLITLRASRD AIEIIDRYDV ECIPEEYRTN KLLYITDSSI
101: PKNCTRYLKV QKYMKAPIFI YYQLDNYYQN HRRYVKSRSD QQLLHGLEYS HTSSCEPEES SNGLPIVPCG LIAWSMFNDT FTFSRERTKL NVSRNNIAWK
201: SDREHKFGKN VYPINFQNGT LIGGAKLDPK IPLSDQEDFI VWMRAAALLS FRKLYGRIEE DLEPGKVVEV NLMNNYNTYS FSGQKKLILS TSNWLGGRND
301: FLGITYLVVG SSSIVISIIF MLLHLKNPRP YGDNSWNKKS LSS

Arabidopsis Description

ALIS2Putative ALA-interacting subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q67YS6]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.