Factsheet for TraesCS5A01G423800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G432300.1	Wheat	plasma membrane	98.26	98.26
TraesCS5B01G426100.1	Wheat	plasma membrane	95.64	95.64
HORVU5Hr1G103360.3	Barley	golgi	91.86	82.72
Os03t0785500-01	Rice	plasma membrane	80.81	79.2
KXG37410	Sorghum	plasma membrane	75.0	74.78
Zm00001d034351_P001	Maize	plasma membrane	72.67	72.46
GSMUA_Achr7P01140_001	Banana	plasma membrane	70.06	69.65
VIT_10s0003g03980.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	64.53	67.07
KRH37801	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	67.44	66.67
KRH12833	Soybean	cytosol	47.09	63.78
Solyc08g023460.2.1	Tomato	plasma membrane	61.63	61.99
AT5G46150.1	Thale cress	golgi, peroxisome, plasma membrane	58.72	58.89
CDY35146	Canola	plasma membrane	58.43	58.77
CDY03242	Canola	golgi, peroxisome, plasma membrane, plastid	58.14	58.48
Bra017577.1-P	Field mustard	plasma membrane	58.14	58.48
TraesCS7A01G482200.1	Wheat	plasma membrane	56.4	55.27
KRH12834	Soybean	plasma membrane	15.99	55.0
CDX77634	Canola	golgi	18.02	54.87
TraesCS6A01G155600.1	Wheat	plasma membrane, plastid	54.65	54.02
TraesCS1A01G350000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	50.58	49.86
TraesCS5A01G519200.1	Wheat	plasma membrane	48.55	49.85
TraesCS5A01G380500.1	Wheat	plasma membrane	47.38	45.4

Protein Annotations

EnsemblPlants:TraesCS5A01G423800.1	EnsemblPlantsGene:TraesCS5A01G423800	GO:GO:0005575	GO:GO:0016020	InterPro:CDC50/LEM3_fam	PANTHER:PTHR10926
PANTHER:PTHR10926:SF29	PFAM:PF03381	PIRSF:PIRSF015840	SEG:seg	TMHMM:TMhelix	MapMan:5.8.2.1.1.2
MapMan:24.1.2.4.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:609271748..609274153

Molecular Weight (calculated)

38792.4 Da

IEP (calculated)

9.344

GRAVY (calculated)

-0.267

Length

344 amino acids

Sequence
(BLAST)

001: MDEAGTSASA GSAPRGGRPA RSGVFYIFTQ QDLPAWKPAM TPGYVIAIFL IIGIIFVPVG LICLQASNRV AEIVHRYDID CVPNAYRSNK QAYIKDSSIS
101: KKCIQKVKVQ YHMKAPIYVY YELDNFYQNH RRYIKSRSDK QLRHGLQYTD SSCSPMERSN GLPVVPCGLI AWSLFNDTYD FTRGSMGLMV DRKNISWRSD
201: REHKYGQDVY PFNFQNGSLI GGGKLDPDIP LSNQEDLIVW MRAAALPQFR KLYGVIEEDI QADETITMHI TNNYNTYSFG GKKSLVLTTS TWLGGKNDFL
301: GYAYLITGSS SIFLSILFAL IHVKIPRPHG DAAYLSWSRK NGNN

Best Arabidopsis Sequence Match ( AT5G46150.2 )
(BLAST)

001: MMEVEGSMNR APDQSSFLRS RRSKALYQFK QQKLPACKPV LTPISVITVF MLMGFVFIPI GLITLRASRD AIEIIDRYDV ECIPEEYRTN KLLYITDSSI
101: PKNCTRYLKV QKYMKAPIFI YYQLDNYYQN HRRYVKSRSD QQLLHGLEYS HTSSCEPEES SNGLPIVPCG LIAWSMFNDT FTFSRERTKL NVSRNNIAWK
201: SDREHKFGKN VYPINFQNGT LIGGAKLDPK IPLSDQEDFI VWMRAAALLS FRKLYGRIEE DLEPGKVVEV NLMNNYNTYS FSGQKKLILS TSNWLGGRND
301: FLGITYLVVG SSSIVISIIF MLLHLKNPRP YGDNSWNKKS LSS

Arabidopsis Description

ALIS2Putative ALA-interacting subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q67YS6]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.