Factsheet for HORVU1Hr1G081400.10

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G093390.1	Barley	cytosol, endoplasmic reticulum	82.13	77.87
TraesCS1D01G352700.1	Wheat	plasma membrane	63.4	64.71
TraesCS1B01G364300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	63.4	64.71
TraesCS1A01G350000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	63.98	63.61
EES19858	Sorghum	plasma membrane	54.76	55.56
Zm00001d038750_P006	Maize	plasma membrane	53.31	54.57
Os05t0529900-00	Rice	plasma membrane	51.87	52.33
GSMUA_Achr2P11380_001	Banana	plasma membrane	45.82	46.09
GSMUA_Achr4P29460_001	Banana	plasma membrane	46.11	45.98
VIT_00s1667g00010.t01	Wine grape	plasma membrane	40.63	45.78
HORVU6Hr1G031530.3	Barley	plastid	44.38	43.75
PGSC0003DMT400055262	Potato	plasma membrane	41.79	42.15
Solyc02g036440.2.1	Tomato	plasma membrane	41.5	41.86
KRG94866	Soybean	plasma membrane	41.79	41.55
KRH09908	Soybean	plasma membrane	40.35	40.7
VIT_00s2279g00010.t01	Wine grape	cytosol	27.95	40.59
HORVU0Hr1G022300.1	Barley	endoplasmic reticulum	43.23	37.78
HORVU5Hr1G020720.6	Barley	cytosol	24.5	36.8
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	36.6	35.88
KRH23423	Soybean	plasma membrane	36.6	33.33
HORVU5Hr1G094000.6	Barley	plasma membrane, plastid	36.02	32.89
HORVU5Hr1G103360.3	Barley	golgi	35.73	32.46
VIT_16s0115g00160.t01	Wine grape	cytosol	17.0	27.83
HORVU4Hr1G085300.1	Barley	golgi	6.05	16.41

Protein Annotations

EnsemblPlants:HORVU1Hr1G081400.10	EnsemblPlantsGene:HORVU1Hr1G081400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:CDC50/LEM3_fam
PANTHER:PTHR10926	PANTHER:PTHR10926:SF26	PFAM:PF03381	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46317D
UniProt:A0A287GH08	MapMan:5.8.2.1.1.2	MapMan:24.1.2.4.1.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:527656192..527657935

Molecular Weight (calculated)

38384.7 Da

IEP (calculated)

10.035

GRAVY (calculated)

-0.629

Length

347 amino acids

Sequence
(BLAST)

001: TQMSVSGSES EVSRRSANKP KYSKFTQQEL PACKPLLTPG IVIGAFSLIG IIFVPIGLAS LSASQEIVEL VDRYDEECVT ASDKIGFIQD SKVDKACTRK
101: ITVPKPMKGP IHVYYQLENF YQNHRRYVKS RSDQQLRDKD YKDPKAVIKA CDPEATTGDG SLIVPCGLIA WSLFNDTYAF SVNKKSVTVN KKDIAWASDK
201: NSKFGSNVFP VNFQKGGLVG GGNLNDKLPV SERAGGFDRV DADGGAADVP EAVREDRGGH HGERRDHGGD PEQLQHVQLR GHQGGGAVDG VVDRRQEQLH
301: RGRLRGRRWH LPPPRHGLRR PLRRQTPEPR RPGVPVVEQG VRRVLAL

Best Arabidopsis Sequence Match ( AT1G16360.2 )
(BLAST)

001: MSFSATSSIA LGGGSAEASA AKNTSKRPKY SRFTQQELPA CKPILTPKWV ILTFLVSGVV FIPLGVICLF ASQGVIEIVD RYDTDCIPLS SRDNKVRYIQ
101: GLEDKRCNRT ITVTKTMKNP VYVYYQLENY YQNHRRYVKS RQDGQLRSPK DEHETKSCAP EDTLGGQPIV PCGLVAWSLF NDTYDFTRNN QKLPVNKKDI
201: SWKSDRESKF GKNVFPKNFQ KGSLIGGKSL DQDIPLSEQE DLIVWMRTAA LPTFRKLYGK IDTDLQAGDT IKVLLQNNYN TYSFNGKKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VSFSVLYLAK PRQLGDPSYL SWNRSAGGGR

Arabidopsis Description

LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Source:TAIR;Acc:AT1G16360]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.