Factsheet for Os03t0120100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027401_P001	Maize	plasma membrane	83.53	83.53
KXG40321	Sorghum	plasma membrane	81.76	82.25
HORVU4Hr1G085300.1	Barley	golgi	29.71	78.91
TraesCS4D01G345100.1	Wheat	plasma membrane	77.06	78.68
TraesCS5A01G519200.1	Wheat	plasma membrane	76.76	77.91
TraesCS4B01G350400.1	Wheat	plasma membrane	76.18	77.78
HORVU5Hr1G020720.6	Barley	cytosol	50.59	74.46
Os05t0529900-00	Rice	plasma membrane	71.47	70.64
VIT_00s2279g00010.t01	Wine grape	cytosol	47.94	68.2
GSMUA_Achr4P29460_001	Banana	plasma membrane	69.71	68.1
GSMUA_Achr2P11380_001	Banana	plasma membrane	68.53	67.54
VIT_00s1667g00010.t01	Wine grape	plasma membrane	60.88	67.21
PGSC0003DMT400055262	Potato	plasma membrane	60.88	60.17
Solyc02g036440.2.1	Tomato	plasma membrane	60.59	59.88
Os02t0173800-01	Rice	plasma membrane	61.18	59.43
KRH09908	Soybean	plasma membrane	60.0	59.3
KRG94866	Soybean	plasma membrane	59.41	57.88
Os06t0665000-01	Rice	plasma membrane	59.71	56.7
Os09t0560600-01	Rice	plasma membrane	55.59	53.85
Os03t0785500-01	Rice	plasma membrane	51.47	49.86
VIT_16s0115g00160.t01	Wine grape	cytosol	30.88	49.53
KRH23423	Soybean	plasma membrane	55.29	49.34
KRH06673	Soybean	endoplasmic reticulum, golgi, plasma membrane	48.24	46.33
Os09t0560700-01	Rice	cytosol, peroxisome, plastid	0.88	0.93

Protein Annotations

MapMan:24.1.2.4.1.2	EntrezGene:4331429	MapMan:5.8.2.1.1.2	ProteinID:ABF93688.1	ProteinID:BAF10699.1	ProteinID:BAS82019.1
InterPro:CDC50/LEM3_fam	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:Os03g0120100	EnsemblPlants:Os03t0120100-01	PFAM:PF03381	PIRSF:PIRSF015840	PANTHER:PTHR10926
PANTHER:PTHR10926:SF26	UniProt:Q10SJ9	TMHMM:TMhelix	UniParc:UPI0000DB4BFF	RefSeq:XP_015627902.1	SEG:seg

Description

Protein of unknown function DUF284, transmembrane eukaryotic family protein. (Os03t0120100-01)

Coordinates

chr3:-:1102854..1106636

Molecular Weight (calculated)

37909.5 Da

IEP (calculated)

8.700

GRAVY (calculated)

-0.221

Length

340 amino acids

Sequence
(BLAST)

001: MDPLESEGGS QKSNNKPKYS KFTQQELPAC KPLLTPGIVV ATFLLIGIIF VPIGLASLSA SQEIVELVDR YDTNCVSTLD KVGFIQNTDT DKTCTRTLTV
101: PKHMKSPIQI YYQIGDFYQN HRRYVKSRSD KQLRYKNAVH LTKDCDPEGN TVDGAPIIPC GLIAWSLFND TYTISVNKKA IEVNKKDIAW KSDKTDKFGS
201: DIYPSNFQKG SLIGGAKLNE SIPLSEQEDL IVWMRTAALP TFRKLYGRIE TDIMANDQLT VVIQNNYNTY SFGGSKALVL STTSWIGGKN NFIGVAYLTI
301: GGLCIFLAVG FVVLLYMVKP RTLGDPSYLS WNRDTPDRPN

Best Arabidopsis Sequence Match ( AT1G79450.1 )
(BLAST)

001: MSSTAASSTV GGGGSSEISG VKKTSKRPKY SRFTQQELPA CKPILTPRWV ILTFLVAGVV FIPLGVICLF ASQGVVEIVD RYDTDCIPTS SRNNMVAYIQ
101: GEGDKICKRT ITVTKAMKHP VYVYYQLENF YQNHRRYVKS RNDAQLRSPK EEHDVKTCAP EDNVGGEPIV PCGLVAWSLF NDTYSFSRNS QQLLVNKKGI
201: SWKSDRENKF GKNVFPKNFQ KGAPIGGGTL NISKPLSEQE DLIVWMRTAA LPTFRKLYGK IETDLHAGDT ITVLLQNNYN TYSFNGQKKL VLSTTSWLGG
301: RNDFLGIAYL TVGSICLFLA VTFAVLYLVK PRQLGDPSYL SWNRSAGGLQ

Arabidopsis Description

ALIS5ALA-interacting subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.