Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g099280.1.1 | Tomato | nucleus | 88.05 | 88.05 |
| Os03t0308900-01 | Rice | nucleus | 7.35 | 16.94 |
| KXG39524 | Sorghum | cytosol | 1.77 | 14.18 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 15.75 | 13.69 |
| KRH11949 | Soybean | nucleus | 12.83 | 13.21 |
| KRH36974 | Soybean | nucleus | 12.3 | 12.67 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 11.24 | 12.12 |
| AT3G66652.3 | Thale cress | nucleus | 10.62 | 12.04 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 11.15 | 12.02 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 11.15 | 11.99 |
| Zm00001d028902_P003 | Maize | nucleus | 11.15 | 11.88 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 9.73 | 11.79 |
| Os03t0308850-00 | Rice | mitochondrion, nucleus | 1.68 | 9.5 |
| Bra001208.1-P | Field mustard | nucleus | 10.27 | 9.16 |
| CDY57615 | Canola | plastid | 1.33 | 6.36 |
| PGSC0003DMT400008250 | Potato | nucleus | 0.27 | 2.54 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011772 | EnsemblPlantsGene:PGSC0003DMG400004621 | EntrezGene:102584286 | InterPro:Fip1 | ncoils:Coil | PANTHER:PTHR13484 |
| PANTHER:PTHR13484:SF0 | PFAM:PF05182 | PGSC:PGSC0003DMG400004621 | RefSeq:XP_006349838.1 | SEG:seg | UniParc:UPI000296F893 |
| UniProt:M1A049 | MapMan:35.1 | : | : | : | : |
Description
Fip1 motif-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004621]
Coordinates
chr12:+:60014012..60022309
Molecular Weight (calculated)
128799.0 Da
IEP (calculated)
6.259
GRAVY (calculated)
-1.158
Length
1130 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVNVAGDDDD DFGDIYADVL VQASSAINAL QSSTKVQTEV NEVNYNAAVG NCNRENAVRG EEECESESGD DLNILLNDDE GDDNFLNAGC DEDETEGNGG
0101: FSVSDKGNGL GQNSNGSGSG DGEKNSYKNT RPPQAAYSSH LKANRSSCAP SYSTAFVKGK WEDNSYTQRV GSGFAAQNGQ SFSLPRSRNI LDVNIDMFEK
0201: KPWRYPGTDL TDYFNFGFDE DSWKQYCNCL DEHRDQAKKI VKDSDYKTSK ISKPKGREIE VEESMIERRP STDVGRPQYR DSGVVIQIAL QQSMEDPISS
0301: TKEQREASEN GDVVGGDRKE FLCFSSASED ELTSLEGIGE GSGKSTSGRI TPVCEHVSMG SDNYGNSEFS DADERHHQEG TYCNVDQTSG AIRSSHDANK
0401: SSERDISDPR QPIKLQEPLH GGGREHSPGS SCCSLSHGGT SGDGTFLDLE KSHDHHTRLL SNTESELREK GTIDYQPIYG TNHNRTKSGD PKYFTRGRRS
0501: VQRELLHDRR RPGRMSGTIP AHLKDEDSHK SDARILYERR NSTVIRYRQR DRRYAFDSHE REDTSHFKRA EPVYSNAGRF SDYPCRDSFT KNPEMEHQLR
0601: CKYDKNWSGG RSVKRKLDPL ELSIYTDDEL LERDRPHYGR RLTVQDMDTV PFHESEQWFD KYISYSDDEN PSQRMRKIDQ LPSKKRVRTD DLVTECNYIY
0701: DIMEETDNRY RPYNHRDTNI LEDGYHVNLT YFRREIKSPS RGKRRDVSPC KSSNDICFMD LKDEEGRFDG YRPPSFRLYR ESCTSSRRWQ SPELPRGRHG
0801: IFSGTRKCDG GANLTNSIGS DQTSKYPGNQ DNFKRRRGGQ QSEGMQWVED ENSSRYQQNI FDAERTSYSF RRSSSDRRFN SFDNNHGPNP VEKLLDDRHV
0901: EQEKYKLIRE GNNASQFGQG SKVFHKDNHW RRFPRGRDSV DTGLIVENGE SSGRCSKAGG VTSFDRYSHL DSDSYVELKP IDGTSKPHFR KTLRTRNVTT
1001: DPKENDKGRL DIFSDANQEE SLDIEEGQII EEMNEKIIKK RITCSGKSQI SEMKNFAYDK NVEGQDNNPR ILEIMAKMEK RGERFKQPIA LKSDTKNVSK
1101: PLVDSFALST EPMQPRPARK RRWAASKATV
0101: FSVSDKGNGL GQNSNGSGSG DGEKNSYKNT RPPQAAYSSH LKANRSSCAP SYSTAFVKGK WEDNSYTQRV GSGFAAQNGQ SFSLPRSRNI LDVNIDMFEK
0201: KPWRYPGTDL TDYFNFGFDE DSWKQYCNCL DEHRDQAKKI VKDSDYKTSK ISKPKGREIE VEESMIERRP STDVGRPQYR DSGVVIQIAL QQSMEDPISS
0301: TKEQREASEN GDVVGGDRKE FLCFSSASED ELTSLEGIGE GSGKSTSGRI TPVCEHVSMG SDNYGNSEFS DADERHHQEG TYCNVDQTSG AIRSSHDANK
0401: SSERDISDPR QPIKLQEPLH GGGREHSPGS SCCSLSHGGT SGDGTFLDLE KSHDHHTRLL SNTESELREK GTIDYQPIYG TNHNRTKSGD PKYFTRGRRS
0501: VQRELLHDRR RPGRMSGTIP AHLKDEDSHK SDARILYERR NSTVIRYRQR DRRYAFDSHE REDTSHFKRA EPVYSNAGRF SDYPCRDSFT KNPEMEHQLR
0601: CKYDKNWSGG RSVKRKLDPL ELSIYTDDEL LERDRPHYGR RLTVQDMDTV PFHESEQWFD KYISYSDDEN PSQRMRKIDQ LPSKKRVRTD DLVTECNYIY
0701: DIMEETDNRY RPYNHRDTNI LEDGYHVNLT YFRREIKSPS RGKRRDVSPC KSSNDICFMD LKDEEGRFDG YRPPSFRLYR ESCTSSRRWQ SPELPRGRHG
0801: IFSGTRKCDG GANLTNSIGS DQTSKYPGNQ DNFKRRRGGQ QSEGMQWVED ENSSRYQQNI FDAERTSYSF RRSSSDRRFN SFDNNHGPNP VEKLLDDRHV
0901: EQEKYKLIRE GNNASQFGQG SKVFHKDNHW RRFPRGRDSV DTGLIVENGE SSGRCSKAGG VTSFDRYSHL DSDSYVELKP IDGTSKPHFR KTLRTRNVTT
1001: DPKENDKGRL DIFSDANQEE SLDIEEGQII EEMNEKIIKK RITCSGKSQI SEMKNFAYDK NVEGQDNNPR ILEIMAKMEK RGERFKQPIA LKSDTKNVSK
1101: PLVDSFALST EPMQPRPARK RRWAASKATV
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.