Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G182200.1 | Wheat | nucleus | 81.35 | 72.42 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 81.46 | 72.31 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 80.6 | 71.76 |
| Os03t0308900-01 | Rice | nucleus | 30.65 | 58.37 |
| KXG39524 | Sorghum | cytosol | 7.18 | 47.52 |
| Zm00001d028902_P003 | Maize | nucleus | 39.34 | 34.59 |
| KRH11949 | Soybean | nucleus | 14.58 | 12.39 |
| KRH36974 | Soybean | nucleus | 14.26 | 12.12 |
| AT3G66652.3 | Thale cress | nucleus | 12.22 | 11.43 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 15.65 | 11.23 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 15.22 | 11.12 |
| CDY57616 | Canola | nucleus | 12.0 | 11.09 |
| PGSC0003DMT400011772 | Potato | nucleus | 11.79 | 9.73 |
| Solyc12g099280.1.1 | Tomato | nucleus | 11.58 | 9.56 |
| CDY57615 | Canola | plastid | 2.36 | 9.32 |
| CDX74095 | Canola | nucleus | 12.43 | 9.15 |
| Bra001208.1-P | Field mustard | nucleus | 12.11 | 8.92 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G053460.2 | EnsemblPlantsGene:HORVU4Hr1G053460 | InterPro:Fip1 | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 | PFAM:PF05182 |
| SEG:seg | UniParc:UPI000B4766C7 | UniProt:A0A287P3T2 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:445156849..445160866
Molecular Weight (calculated)
106984.0 Da
IEP (calculated)
6.454
GRAVY (calculated)
-0.973
Length
933 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSSMADPAD AATAPANDDD VDDLYADLDD QVTAALAAAG ESGGSNAKDS DPATDAEADA IEAVDLGDGL AGYSSSDEES EDDLHIVLNE DGCAPPPPSA
101: GRCEEGWAEQ SEEGELRASL LKGLSAKDGG QRKPHGLHYK GPLDKTTVPT TGQGDLGHQH AFQKDYYFFL PRNRTVFDIN IEAFQQKPWR QHGIDITDYF
201: NFGLDEEGWR KYCFGMKQFT QRARSLAEKS SVCIQESHHN LESSKLMPRS AIYSGFEGSN DVDKPKGRAI DVQGGLFERL PSADMWRPRK RDSDVVIQVN
301: MMLSPSNHST SDDNSTVNDK CMTTERVLVN DPSVKCLTDT NHLVDKVIHK EVLNGCFSEC TGSKLDTRDS ASARDHFSSP RYSDMVSEES TEDCYFKRAN
401: RHPNSKATCS DTKLKDAYVR SDFCRHSSKS DQESAKGDSH SYTPSPADDR YDETDEPDFM SSGVFMNRQS DYRLLKYRHQ GRKEKKRKGS ARVRYDVFEK
501: EEKMAYSYTS RYDRKHEEKR SSSTFLGNDC RNAVHNEVYE RRDYSPAERA ALRNGVHRFS TSSNHHRDRF SWHECNDDQD DLQRLSLAKG WQRRHDHGYG
601: YKSVQKAELS DDIDRHMYRE SYYQETRRVR HGHGEDDELF DYNDYRFGEF CGPEVRRKYQ SRRSAESSDE HWRHPYHLIL PPRANDYPKN PERNWSSPGL
701: TSLSSRNSRN AKFMQYHRDE YYQNNKHHNS SVHVDNIQQS VSFTDAPSET GYCILPVKRK FHAGLGSISH KDLGIAISKG RRLKHDQFMI GDRKLYAVEM
801: HNSPKETVRE AIYSFSDMRN SDTISNIHDE RRHEHMNIQP KDADSIGLND RKRKVNFEEI KSETLYTYII FNISFPLSSY CGKRVISTSI HVHIEREERE
901: WGFMLLKTEL YIAQYGGGIC KSSVFFEIYV FIF
101: GRCEEGWAEQ SEEGELRASL LKGLSAKDGG QRKPHGLHYK GPLDKTTVPT TGQGDLGHQH AFQKDYYFFL PRNRTVFDIN IEAFQQKPWR QHGIDITDYF
201: NFGLDEEGWR KYCFGMKQFT QRARSLAEKS SVCIQESHHN LESSKLMPRS AIYSGFEGSN DVDKPKGRAI DVQGGLFERL PSADMWRPRK RDSDVVIQVN
301: MMLSPSNHST SDDNSTVNDK CMTTERVLVN DPSVKCLTDT NHLVDKVIHK EVLNGCFSEC TGSKLDTRDS ASARDHFSSP RYSDMVSEES TEDCYFKRAN
401: RHPNSKATCS DTKLKDAYVR SDFCRHSSKS DQESAKGDSH SYTPSPADDR YDETDEPDFM SSGVFMNRQS DYRLLKYRHQ GRKEKKRKGS ARVRYDVFEK
501: EEKMAYSYTS RYDRKHEEKR SSSTFLGNDC RNAVHNEVYE RRDYSPAERA ALRNGVHRFS TSSNHHRDRF SWHECNDDQD DLQRLSLAKG WQRRHDHGYG
601: YKSVQKAELS DDIDRHMYRE SYYQETRRVR HGHGEDDELF DYNDYRFGEF CGPEVRRKYQ SRRSAESSDE HWRHPYHLIL PPRANDYPKN PERNWSSPGL
701: TSLSSRNSRN AKFMQYHRDE YYQNNKHHNS SVHVDNIQQS VSFTDAPSET GYCILPVKRK FHAGLGSISH KDLGIAISKG RRLKHDQFMI GDRKLYAVEM
801: HNSPKETVRE AIYSFSDMRN SDTISNIHDE RRHEHMNIQP KDADSIGLND RKRKVNFEEI KSETLYTYII FNISFPLSSY CGKRVISTSI HVHIEREERE
901: WGFMLLKTEL YIAQYGGGIC KSSVFFEIYV FIF
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEGE YVWDERSCVR IGREYA
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEGE YVWDERSCVR IGREYA
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.