Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G056200.1 | Wheat | nucleus | 83.71 | 94.35 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 91.39 | 90.12 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 90.99 | 89.66 |
| KXG37677 | Sorghum | nucleus | 62.8 | 62.27 |
| Zm00001d033843_P007 | Maize | nucleus | 59.75 | 60.03 |
| Zm00001d013380_P001 | Maize | nucleus | 59.83 | 59.87 |
| CDY55018 | Canola | mitochondrion | 4.78 | 55.45 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.99 | 43.22 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 39.31 | 37.21 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 36.65 | 33.4 |
| CDX88655 | Canola | nucleus | 27.33 | 33.37 |
| Bra006786.1-P | Field mustard | nucleus | 27.33 | 33.33 |
| CDY43886 | Canola | nucleus | 30.23 | 33.25 |
| KRH37905 | Soybean | nucleus | 33.75 | 32.7 |
| Bra002677.1-P | Field mustard | nucleus | 29.91 | 32.59 |
| KRH12930 | Soybean | nucleus | 33.28 | 32.59 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 36.65 | 31.75 |
| AT5G58040.1 | Thale cress | nucleus | 29.21 | 31.19 |
| CDY11833 | Canola | nucleus | 25.69 | 30.8 |
| Solyc07g005320.2.1 | Tomato | nucleus | 32.58 | 30.14 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 13.16 | 28.77 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 11.12 | 15.22 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G009390.7 | EnsemblPlantsGene:HORVU4Hr1G009390 | InterPro:Fip1 | PANTHER:PTHR36884 | PFAM:PF05182 | SEG:seg |
| UniParc:UPI000B46F2B6 | UniProt:A0A287N4W9 | MapMan:16.2.1.2.6 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:26675893..26687117
Molecular Weight (calculated)
142498.0 Da
IEP (calculated)
6.448
GRAVY (calculated)
-1.389
Length
1277 amino acids
Sequence
(BLAST)
(BLAST)
0001: LKPRGLLPIG RAPKRTWRLS PDPHPHIAPP PSAPPAGSRR RHGGRRRVRR DPLAGVDPTT DWVDEDDDGA ALPAVKREVD AKPPPPAAED PDPLMGVGAD
0101: DPGAAIPGLS SSAAAGGAAG SEEWDSDSED DLQIVLNETD GRRRLGEDEG DDEDGEDLLI VADGPHIPGM EEQEWVEDGT AAGPEGERKE GGEPGKTGPM
0201: PGGRIGYSGG GPGFHPQHHS MFKYVRPGAP TGGAPGAPGQ FRPPGPPGPF SGRGRGDWRP GAGRGMNKGF HSGYGMTPWG GAGRGFGGGL DFTLPPHKAI
0301: FDIDIDTTFE EKPWKYPGAE ISDFFNFGLD EEKWKDYCKQ LDQSRLESTM QSRIRVYESG RSEQDYDPDL PPELAAAAGH HDISADNRNK VDNGHTDFNA
0401: QGRVPTSNRP AVMTGRPIQV ETGYGERFPS ADTRLPRMRE SDSVIEIVCE APADDPIVAD SSVDQSEKDS QGGKKSNGVE ESEVYTSEKT NNSSYNSTLG
0501: KAEHTRSLPV SSERDMLTSD VHGRSPPNYK IRGSPSRGVR LKGRSQGVNP SREAEGSDVV PRKTTSSKRH RDTLRENNPI DDSETKDGLK GSPTVADETT
0601: DKLSTEDQFA DNDDRLALVD SAEVDADDAI SEPHMASDTN EDDNEDHSSK KQKIVSKVEQ PPGLNNSSDQ VDLKTLNSEN TRGVRSGSSK DHQKRLESGE
0701: EVLQDRRSRR VNDVRRHHDG EERDPRRKDV SARDVKPEIE RTRLASRGRD DIHHPYGNRD RDIRGKSFDR VRETEILQRR EDIMHNRRGK EEDLRLNYNA
0801: EVGARHRNKL RPIDRNDRDE DPHPRKLLDD GDLRGSRQRE RGDMVLHGRE SLDDSHIKRK KDEENTRRMK PENEDPVHGY RGRDDPNRRK RERDDGIDQK
0901: RRDDGVRMRE KADDRSFVKN KEDNLRQREK EDRQRPKHES TLLLQREEAR GTGRGGRVMD EKIVSGGRKK DESRSALLSK ETQERIKQNE PGRRGQGAEE
1001: NSMQNKGRAD VRPRDDNPNN SERNSRQDKI NKTHDNNRVS SSSDARQASR DKPREGTRKG RGSVPNEKDL HRSSKRRRED HESHRSGKVE SKGGKEQENG
1101: RDHATSSKTS KNTQRHDSFV KQGEEEAMSD DENTDDSRRG RSKLERWTSH KEIDYSTIDN ETTHAFPSIK ADVQPPTADA SGKSDVPAVV VSSDIKSSGD
1201: NGQASEMTAE ERDRHLDTVE RLKRRSERFK LPMPGEKEAP QNKKVDAEVQ TPQNESPAAD VEVKPERPAR KRRWTGS
0101: DPGAAIPGLS SSAAAGGAAG SEEWDSDSED DLQIVLNETD GRRRLGEDEG DDEDGEDLLI VADGPHIPGM EEQEWVEDGT AAGPEGERKE GGEPGKTGPM
0201: PGGRIGYSGG GPGFHPQHHS MFKYVRPGAP TGGAPGAPGQ FRPPGPPGPF SGRGRGDWRP GAGRGMNKGF HSGYGMTPWG GAGRGFGGGL DFTLPPHKAI
0301: FDIDIDTTFE EKPWKYPGAE ISDFFNFGLD EEKWKDYCKQ LDQSRLESTM QSRIRVYESG RSEQDYDPDL PPELAAAAGH HDISADNRNK VDNGHTDFNA
0401: QGRVPTSNRP AVMTGRPIQV ETGYGERFPS ADTRLPRMRE SDSVIEIVCE APADDPIVAD SSVDQSEKDS QGGKKSNGVE ESEVYTSEKT NNSSYNSTLG
0501: KAEHTRSLPV SSERDMLTSD VHGRSPPNYK IRGSPSRGVR LKGRSQGVNP SREAEGSDVV PRKTTSSKRH RDTLRENNPI DDSETKDGLK GSPTVADETT
0601: DKLSTEDQFA DNDDRLALVD SAEVDADDAI SEPHMASDTN EDDNEDHSSK KQKIVSKVEQ PPGLNNSSDQ VDLKTLNSEN TRGVRSGSSK DHQKRLESGE
0701: EVLQDRRSRR VNDVRRHHDG EERDPRRKDV SARDVKPEIE RTRLASRGRD DIHHPYGNRD RDIRGKSFDR VRETEILQRR EDIMHNRRGK EEDLRLNYNA
0801: EVGARHRNKL RPIDRNDRDE DPHPRKLLDD GDLRGSRQRE RGDMVLHGRE SLDDSHIKRK KDEENTRRMK PENEDPVHGY RGRDDPNRRK RERDDGIDQK
0901: RRDDGVRMRE KADDRSFVKN KEDNLRQREK EDRQRPKHES TLLLQREEAR GTGRGGRVMD EKIVSGGRKK DESRSALLSK ETQERIKQNE PGRRGQGAEE
1001: NSMQNKGRAD VRPRDDNPNN SERNSRQDKI NKTHDNNRVS SSSDARQASR DKPREGTRKG RGSVPNEKDL HRSSKRRRED HESHRSGKVE SKGGKEQENG
1101: RDHATSSKTS KNTQRHDSFV KQGEEEAMSD DENTDDSRRG RSKLERWTSH KEIDYSTIDN ETTHAFPSIK ADVQPPTADA SGKSDVPAVV VSSDIKSSGD
1201: NGQASEMTAE ERDRHLDTVE RLKRRSERFK LPMPGEKEAP QNKKVDAEVQ TPQNESPAAD VEVKPERPAR KRRWTGS
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.