Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006786.1-P | Field mustard | nucleus | 99.62 | 99.52 |
| CDY11833 | Canola | nucleus | 79.92 | 78.5 |
| CDY55018 | Canola | mitochondrion | 7.27 | 69.09 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 38.34 | 68.66 |
| CDY43886 | Canola | nucleus | 71.51 | 64.43 |
| AT5G58040.1 | Thale cress | nucleus | 70.75 | 61.87 |
| PGSC0003DMT400008250 | Potato | nucleus | 4.02 | 35.59 |
| KRH37905 | Soybean | nucleus | 40.34 | 32.02 |
| KRH12930 | Soybean | nucleus | 39.87 | 31.98 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 44.36 | 31.48 |
| Solyc07g005320.2.1 | Tomato | nucleus | 38.81 | 29.42 |
| Zm00001d033843_P007 | Maize | nucleus | 34.23 | 28.17 |
| Zm00001d013380_P001 | Maize | nucleus | 34.23 | 28.06 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 30.21 | 27.89 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 34.51 | 27.88 |
| KXG37677 | Sorghum | nucleus | 34.23 | 27.8 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 34.03 | 27.47 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 33.37 | 27.33 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 34.8 | 26.98 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 32.22 | 24.05 |
| CDY57616 | Canola | nucleus | 12.33 | 12.77 |
| CDX74095 | Canola | nucleus | 11.85 | 9.78 |
| CDY57615 | Canola | plastid | 1.63 | 7.2 |
Protein Annotations
| EnsemblPlants:CDX88655 | EnsemblPlantsGene:GSBRNA2T00148698001 | InterPro:Fip1 | PANTHER:PTHR36884 | PFAM:PF05182 | ProteinID:CDX88655 |
| ProteinID:CDX88655.1 | SEG:seg | UniParc:UPI0004EEDF6D | MapMan:16.2.1.2.6 | : | : |
Description
BnaA03g09940D
Coordinates
chrLK031856:+:356509..361144
Molecular Weight (calculated)
117711.0 Da
IEP (calculated)
6.061
GRAVY (calculated)
-1.363
Length
1046 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEDDEFGDL YSDVLPPFQP PPPPLRSIDL NLRSHEQDAA EPNSSSVARV PDTTASKPST TPSHDAISDD KDMNFDIEEP DADSTPAIPG LATDQGTAQV
0101: GEGGYRGQGD DWDSDSEDDL QIVLNDNVAD RRARMGDNED DDEEPLVIVT DADPNQHMEE QQLWGEEAVE GESKEGGEAV KGSAAGPTKA GYNSHGYHHP
0201: FHSQFKYIRP GAAPVSGSVA SAAGQVRPPA NLGPMAGRGR GDWRPMGVRN ASAAQKGYHQ TWGGNTAGRG LDFTLPSHKT IFEFDVDAFE EKPWRYQGVD
0301: ITDYFNFGLN EESWKDYCKQ LDQHRIETTM KSRIRVYESG RTDQSYDPDL PPELAAATGA QVVPVDSSNL VKLDTAQGDS ANIRPPLPPG RPIPVETGSV
0401: ERPSSIDTRA PRMRDLEAII EIVCEDSHED EPSGEKGAEQ ADSGQTFRSS SPVGDRGTRS STVDREDVGG EAGKDAEIEE EQKMSSAVPR SAVEKDDGGE
0501: SKTERSSESS KARSGSHRDH QQLKDSAEEE VIQDRNHCTR PASNKKHHVN NAQHQSRKYQ DIGKEMERTR AGSKGESGKD FDKRKERDVD GGVWRRKEDD
0601: TFSRRGGDEG SRKRDRGDDH VPSRNHVDDG GLRNNYELDY HISKRRKVEE YVRRTRSEKN EISFGQREES ISRLRRERGD RLDYQKRDVQ HKIRDDIYDQ
0701: ASLRHRDDIY MQRDGNERLR ERGDLDKLKL THEDGLSARG RERQVAARGH RGSEDRSSSR MKDEYKEHLT KDTTRQTKQT KRKEHPGEES SSYHRGREDD
0801: IVSNEKKQRL ERTSAKTDKV VDSLDGQRLQ DRKHKDSRRK IKEQREDTDS SRIKQGEQNG SSQVTGLKRT NEARNYRSEI SQQHNATKRH KEDTSSGDEL
0901: QDSKRGRTKL ERWGSHKERD DDITAKGYSS TSKIQEKEKG TNGRASEPNL GSIGKNRNVT EEKSGHDLAE TKDGSEKGLG DRHLDMIVKF KKRSERFKLP
1001: MPTEKDNKAG VKKMESEMLP SAKIEGPADS EVKAERPSRK RRWTSS
0101: GEGGYRGQGD DWDSDSEDDL QIVLNDNVAD RRARMGDNED DDEEPLVIVT DADPNQHMEE QQLWGEEAVE GESKEGGEAV KGSAAGPTKA GYNSHGYHHP
0201: FHSQFKYIRP GAAPVSGSVA SAAGQVRPPA NLGPMAGRGR GDWRPMGVRN ASAAQKGYHQ TWGGNTAGRG LDFTLPSHKT IFEFDVDAFE EKPWRYQGVD
0301: ITDYFNFGLN EESWKDYCKQ LDQHRIETTM KSRIRVYESG RTDQSYDPDL PPELAAATGA QVVPVDSSNL VKLDTAQGDS ANIRPPLPPG RPIPVETGSV
0401: ERPSSIDTRA PRMRDLEAII EIVCEDSHED EPSGEKGAEQ ADSGQTFRSS SPVGDRGTRS STVDREDVGG EAGKDAEIEE EQKMSSAVPR SAVEKDDGGE
0501: SKTERSSESS KARSGSHRDH QQLKDSAEEE VIQDRNHCTR PASNKKHHVN NAQHQSRKYQ DIGKEMERTR AGSKGESGKD FDKRKERDVD GGVWRRKEDD
0601: TFSRRGGDEG SRKRDRGDDH VPSRNHVDDG GLRNNYELDY HISKRRKVEE YVRRTRSEKN EISFGQREES ISRLRRERGD RLDYQKRDVQ HKIRDDIYDQ
0701: ASLRHRDDIY MQRDGNERLR ERGDLDKLKL THEDGLSARG RERQVAARGH RGSEDRSSSR MKDEYKEHLT KDTTRQTKQT KRKEHPGEES SSYHRGREDD
0801: IVSNEKKQRL ERTSAKTDKV VDSLDGQRLQ DRKHKDSRRK IKEQREDTDS SRIKQGEQNG SSQVTGLKRT NEARNYRSEI SQQHNATKRH KEDTSSGDEL
0901: QDSKRGRTKL ERWGSHKERD DDITAKGYSS TSKIQEKEKG TNGRASEPNL GSIGKNRNVT EEKSGHDLAE TKDGSEKGLG DRHLDMIVKF KKRSERFKLP
1001: MPTEKDNKAG VKKMESEMLP SAKIEGPADS EVKAERPSRK RRWTSS
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.