Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37677 | Sorghum | nucleus | 87.88 | 86.72 |
| Zm00001d013380_P001 | Maize | nucleus | 78.84 | 78.53 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 55.55 | 62.31 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 62.31 | 61.16 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 62.31 | 61.11 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 60.03 | 59.75 |
| CDY55018 | Canola | mitochondrion | 4.88 | 56.36 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.78 | 40.68 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 39.81 | 37.51 |
| Bra006786.1-P | Field mustard | nucleus | 28.32 | 34.38 |
| CDX88655 | Canola | nucleus | 28.17 | 34.23 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 37.21 | 33.76 |
| CDY43886 | Canola | nucleus | 30.68 | 33.59 |
| Bra002677.1-P | Field mustard | nucleus | 30.84 | 33.45 |
| KRH37905 | Soybean | nucleus | 34.15 | 32.93 |
| KRH12930 | Soybean | nucleus | 33.2 | 32.36 |
| AT5G58040.1 | Thale cress | nucleus | 30.29 | 32.19 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 36.43 | 31.41 |
| CDY11833 | Canola | nucleus | 26.28 | 31.36 |
| Solyc07g005320.2.1 | Tomato | nucleus | 32.42 | 29.86 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 13.3 | 28.94 |
| Zm00001d028902_P003 | Maize | nucleus | 10.46 | 12.54 |
Protein Annotations
| EnsemblPlants:Zm00001d033843_P007 | EnsemblPlants:Zm00001d033843_T007 | EnsemblPlantsGene:Zm00001d033843 | InterPro:Fip1 | PANTHER:PTHR36884 | PFAM:PF05182 |
| ProteinID:ONM08761.1 | SEG:seg | UniParc:UPI00084501E7 | UniProt:A0A1D6L2S4 | MapMan:16.2.1.2.6 | : |
Description
FIP1[V]-like protein
Coordinates
chr1:+:275587872..275609679
Molecular Weight (calculated)
141593.0 Da
IEP (calculated)
4.980
GRAVY (calculated)
-1.347
Length
1271 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEDDEFGDL YTDILIPTQP PTSTSALSNP VPVETLPRPP PNPNPSPVAA AAAAGVEEDD DWILGGSDPI PGVDPTGDWA DEDDDEGDPA PPVKLPAADN
0101: DLDPLMGGGA EDSGPAIPGL SSSAAAGAAG SDQWDSDSED DIQIVLNETD GRRGLGDDEG DDEDGEDLVI VADGPHITGI DEQDWGEDPV AAGAEGERKD
0201: GGDPGKTAAA PGGRIGYSGG GQGFHQQHHS MFKYVRPGAP VASAGGVPGG PGQFRPAGPS GPFSGRGRGD WRPAAGRGMN KSFHSGYGTA PWGGSGRGFG
0301: GGLDFTLPPH KTIFDIDVET TFEDKPWKYP GADISDFFNF GLDEEKWKDF CKQLDQLRLE STMQSRIRVY ESGRSEQDYD PDLPPELAAV TGHPDISADN
0401: RNKMDNGHTD FSAQGRGPAN VRTPVMTGRP IQVETNYTDR FPSIDSRSHR MRESYSVIEI VCQGRDSMDD ETVDQTEKDS QRGYKGVHDV EEGKPYPTDK
0501: INNSGHNSNL VIKTEHKRQP PVSPECDMLS TDVNAPSPPS YKTRGSPREA RSLKGSSLSQ NSIREIESSN DIIPHQISSE RRHDSRNENL VEGDSEGSLA
0601: ANDNTTDKLS TEDHFDGGGG DDDDATLVGS VEVDGDDATL DPNMPSDANE DDDLVHSDKK QKHIAGVEQP TGHNGSEPVE LRTNENSKGM SGSSKDQQKR
0701: LELGEEVLQD RQSRRVNNAR RHHDAEEHNL RRKDEYSRDV KSDLERSHLP SRGREDIHQS YVNRDRVDMR GRSYDKVRET EILPRRDDGV HSRRAKEEDL
0801: RLEYNVEGGA RHRNKMRPID RNDRDEDLSR KRLDDGEWRG SRQRERGDVV LNRRESLDDS HIKRNKDDEN LRRLKPENED MVMAHGHRAR DDNNRRKKER
0901: GDEIDQKRRD DSGRLQGKVD DRYHAKQKDD NWRQRERDNR QRPKHENVLT LPKEEGRGTG RGSRMMDDKL VSGGRKKGEP RSSVLSKDTR ERTRQNESSR
1001: RGQGVEENNM QNKGRSDVHP RDDSLNSERN SRQEKQNNNR LSGSSDARHA GRDRHRESTR KGRGSELGEH DLHRSSKRRR EDHESHHSGK VETKEVNEQD
1101: SSRGHATLSK KSQNPQPDNS LVNQVEEDAS DDENHEDSRK GRSKLERWTS HKEIEYSNID DDNTETFPTI KADVEADEVG KSEVSAAVGN SDINSNVDTG
1201: QTSDKSDRHL DTVERLKRRS ERFKLPMPGE KDTPQSKKVD TEVQPPQNES TAADMEVKPE RPARKRRWTG S
0101: DLDPLMGGGA EDSGPAIPGL SSSAAAGAAG SDQWDSDSED DIQIVLNETD GRRGLGDDEG DDEDGEDLVI VADGPHITGI DEQDWGEDPV AAGAEGERKD
0201: GGDPGKTAAA PGGRIGYSGG GQGFHQQHHS MFKYVRPGAP VASAGGVPGG PGQFRPAGPS GPFSGRGRGD WRPAAGRGMN KSFHSGYGTA PWGGSGRGFG
0301: GGLDFTLPPH KTIFDIDVET TFEDKPWKYP GADISDFFNF GLDEEKWKDF CKQLDQLRLE STMQSRIRVY ESGRSEQDYD PDLPPELAAV TGHPDISADN
0401: RNKMDNGHTD FSAQGRGPAN VRTPVMTGRP IQVETNYTDR FPSIDSRSHR MRESYSVIEI VCQGRDSMDD ETVDQTEKDS QRGYKGVHDV EEGKPYPTDK
0501: INNSGHNSNL VIKTEHKRQP PVSPECDMLS TDVNAPSPPS YKTRGSPREA RSLKGSSLSQ NSIREIESSN DIIPHQISSE RRHDSRNENL VEGDSEGSLA
0601: ANDNTTDKLS TEDHFDGGGG DDDDATLVGS VEVDGDDATL DPNMPSDANE DDDLVHSDKK QKHIAGVEQP TGHNGSEPVE LRTNENSKGM SGSSKDQQKR
0701: LELGEEVLQD RQSRRVNNAR RHHDAEEHNL RRKDEYSRDV KSDLERSHLP SRGREDIHQS YVNRDRVDMR GRSYDKVRET EILPRRDDGV HSRRAKEEDL
0801: RLEYNVEGGA RHRNKMRPID RNDRDEDLSR KRLDDGEWRG SRQRERGDVV LNRRESLDDS HIKRNKDDEN LRRLKPENED MVMAHGHRAR DDNNRRKKER
0901: GDEIDQKRRD DSGRLQGKVD DRYHAKQKDD NWRQRERDNR QRPKHENVLT LPKEEGRGTG RGSRMMDDKL VSGGRKKGEP RSSVLSKDTR ERTRQNESSR
1001: RGQGVEENNM QNKGRSDVHP RDDSLNSERN SRQEKQNNNR LSGSSDARHA GRDRHRESTR KGRGSELGEH DLHRSSKRRR EDHESHHSGK VETKEVNEQD
1101: SSRGHATLSK KSQNPQPDNS LVNQVEEDAS DDENHEDSRK GRSKLERWTS HKEIEYSNID DDNTETFPTI KADVEADEVG KSEVSAAVGN SDINSNVDTG
1201: QTSDKSDRHL DTVERLKRRS ERFKLPMPGE KDTPQSKKVD TEVQPPQNES TAADMEVKPE RPARKRRWTG S
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.